Pavir.Fa01903 (Panicum virgatum)
B3

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF02362 (B3) IPR003340 Pavir.Fa01903 T023851_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Pavir.Fa01903.1.p B3 56 122

Links

Other B3 family TFs
Other Panicum virgatum TFs

27 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Traes_2DL_896E50180 Triticum aestivum Traes_2DL_896E50180 I 0.857
OMERI08G03480 Oryza meridionalis OMERI08G03480 N 0.851
OBART08G03440 Oryza barthii OBART08G03440 N 0.755
Pavir.Ia04549 Panicum virgatum Pavir.Ia04549 N 0.746
Pavir.Ib00059 Panicum virgatum Pavir.Ib00059 N 0.746
Si036864m.g Setaria italica Si036864m.g N 0.731
Gorai.008G261100 Gossypium raimondii Gorai.008G261100 I 0.731
OPUNC10G16940 Oryza punctata OPUNC10G16940 N 0.716
ORGLA10G0119700 Oryza glaberrima ORGLA10G0119700 N 0.716
ORUFI10G18030 Oryza rufipogon ORUFI10G18030 N 0.716
OS10G0537100 Oryza sativa OS10G0537100 N 0.716
ONIVA10G18740 Oryza nivara ONIVA10G18740 N 0.716
GRMZM2G027253 Zea mays GRMZM2G027253 N 0.716
OGLUM10G17040 Oryza glumaepatula OGLUM10G17040 N 0.716
BGIOSGA031489 Oryza indica BGIOSGA031489 N 0.716
LPERR10G12990 Leersia perrieri LPERR10G12990 N 0.716
OB03G11610 Oryza brachyantha OB03G11610 N 0.716
OB04G29740 Oryza brachyantha OB04G29740 I 0.716
OBART10G17010 Oryza barthii OBART10G17010 N 0.716
fgenesh2_kg.181__3__AT2G46870.1 Arabidopsis lyrata fgenesh2_kg.181__3__AT2G46870.1 N 0.701
NGA1 Arabidopsis thaliana AT2G46870 N 0.701
Carubv10023656m.g Capsella rubella Carubv10023656m.g N 0.701
TCM_015590 Theobroma cacao TCM_015590 I 0.701
AMTR_s00018p00040300 Amborella trichopoda AMTR_s00018p00040300 N 0.701
fgenesh2_kg.4__2914__AT2G46870.1 Arabidopsis lyrata fgenesh2_kg.4__2914__AT2G46870.1 N 0.701
Bostr.5325s0023 Boechera stricta Bostr.5325s0023 N 0.701
Cagra.0050s0013 Capsella grandiflora Cagra.0050s0013 N 0.701