Pavir.Fb00845 (Panicum virgatum)
B3

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF02362 (B3) IPR003340 Pavir.Fb00845 T023858_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Pavir.Fb00845.1.p B3 139 230
Pavir.Fb00845.2.p B3 137 228
Pavir.Fb00845.3.p B3 137 229
Pavir.Fb00845.4.p B3 137 229
Pavir.Fb00845.5.p B3 139 231
Pavir.Fb00845.6.p B3 139 231

Links

Other B3 family TFs
Other Panicum virgatum TFs

28 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Si014404m.g Setaria italica Si014404m.g N 0.891
BRADI1G45517 Brachypodium distachyon BRADI1G45517 N 0.870
Pavir.J28012 Panicum virgatum Pavir.J28012 N 0.870
Sb07g006170 Sorghum bicolor Sb07g006170 N 0.848
ONIVA06G07020 Oryza nivara ONIVA06G07020 N 0.837
ORGLA06G0055700 Oryza glaberrima ORGLA06G0055700 N 0.837
BGIOSGA022464 Oryza indica BGIOSGA022464 N 0.837
OS06G0194400 Oryza sativa OS06G0194400 N 0.837
OMERI06G07230 Oryza meridionalis OMERI06G07230 N 0.837
ORUFI06G06290 Oryza rufipogon ORUFI06G06290 N 0.837
GRMZM2G106673 Zea mays GRMZM2G106673 N 0.837
OLONG_013315 Oryza longistaminata OLONG_013315 N 0.837
LPERR06G05590 Leersia perrieri LPERR06G05590 N 0.837
GRMZM2G173321 Zea mays GRMZM2G173321 N 0.837
OGLUM06G06330 Oryza glumaepatula OGLUM06G06330 N 0.826
OB06G15600 Oryza brachyantha OB06G15600 N 0.826
Traes_7DS_A234A13E1 Triticum aestivum Traes_7DS_A234A13E1 N 0.783
Traes_7BS_9D1E05CB7 Triticum aestivum Traes_7BS_9D1E05CB7 N 0.783
F775_06135 Aegilops tauschii F775_06135 N 0.783
TRIUR3_03303 Triticum urartu TRIUR3_03303 N 0.761
Sb03g026620 Sorghum bicolor Sb03g026620 N 0.761
MLOC_76431 Hordeum vulgare MLOC_76431 N 0.750
evm.TU.supercontig_62.23 Carica papaya evm.TU.supercontig_62.23 N 0.728
Sb06g028730 Sorghum bicolor Sb06g028730 N 0.720
Traes_7DS_C57224E6E Triticum aestivum Traes_7DS_C57224E6E N 0.717
Traes_4AL_1D254E0E4 Triticum aestivum Traes_4AL_1D254E0E4 N 0.707
Traes_7AS_A4B5D1816 Triticum aestivum Traes_7AS_A4B5D1816 N 0.707