CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Pavir.Gb01948
(
Panicum virgatum
)
B3
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF02362 (B3)
IPR003340
Pavir.Gb01948
T023879_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Pavir.Gb01948.1.p
B3
39
133
FACIMCKSHVRPPFQVVVPRSLAPFLPAATAPATVAWRGRSWGMRFTGGRQIQRLEAGWRGFALDAGLRLDDACVLELVEGGPEGVVFRAQVLRA
Pavir.Gb01948.2.p
B3
39
133
FACIMCKSHVRPPFQVVVPRSLAPFLPAATAPATVAWRGRSWGMRFTGGRQIQRLEAGWRGFALDAGLRLDDACVLELVEGGPEGVVFRAQVLRA
Pavir.Gb01948.3.p
B3
39
133
FACIMCKSHVRPPFQVVVPRSLAPFLPAATAPATVAWRGRSWGMRFTGGRQIQRLEAGWRGFALDAGLRLDDACVLELVEGGPEGVVFRAQVLRA
Links
Other
B3
family TFs
Other
Panicum virgatum
TFs
7 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Si012575m.g
Setaria italica
Si012575m.g
N
0.828
Pavir.Ga01965
Panicum virgatum
Pavir.Ga01965
N
0.826
GRMZM2G126194
Zea mays
GRMZM2G126194
N
0.796
Pavir.J18471
Panicum virgatum
Pavir.J18471
N
0.761
LPERR04G06900
Leersia perrieri
LPERR04G06900
N
0.734
MLOC_48372
Hordeum vulgare
MLOC_48372
N
0.713