CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
Pavir.Ha01451
(
Panicum virgatum
)
B3
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF02362 (B3)
IPR003340
Pavir.Ha01451
T023888_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Pavir.Ha01451.1.p
B3
79
185
FSKILTPSDVGKLNRLLIPRQFAEKYFPKMPKTKSEGNDPILTFEDCSTRFIWHFRFSLWRSSTTYVLTKGWPAFVKEKNLNNGDMVSFYHSVNKSIGSHYFYIHIK
Links
Other
B3
family TFs
Other
Panicum virgatum
TFs
6 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Pavir.Ea01754
Panicum virgatum
Pavir.Ea01754
N
0.778
Pavir.Ea01472
Panicum virgatum
Pavir.Ea01472
N
0.740
Si004979m.g
Setaria italica
Si004979m.g
N
0.730
Pavir.J25385
Panicum virgatum
Pavir.J25385
N
0.723
Traes_2DL_896E50180
Triticum aestivum
Traes_2DL_896E50180
I
0.714
Pavir.Eb01212
Panicum virgatum
Pavir.Eb01212
N
0.705