Pavir.J04157 (Panicum virgatum)
B3

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF02362 (B3) IPR003340 Pavir.J04157 T023934_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Pavir.J04157.1.p B3 141 232
Pavir.J04157.2.p B3 105 196

Links

Other B3 family TFs
Other Panicum virgatum TFs

30 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Pavir.J00951 Panicum virgatum Pavir.J00951 N 0.967
Si022916m.g Setaria italica Si022916m.g N 0.946
Sb09g023630 Sorghum bicolor Sb09g023630 N 0.902
BRADI2G22130 Brachypodium distachyon BRADI2G22130 N 0.870
GRMZM2G174610 Zea mays GRMZM2G174610 N 0.870
OPUNC05G18160 Oryza punctata OPUNC05G18160 N 0.859
BGIOSGA017853 Oryza indica BGIOSGA017853 N 0.859
OS05G0481400 Oryza sativa OS05G0481400 N 0.859
ONIVA02G25740 Oryza nivara ONIVA02G25740 N 0.859
ORUFI05G21790 Oryza rufipogon ORUFI05G21790 N 0.859
ORGLA05G0178700 Oryza glaberrima ORGLA05G0178700 N 0.859
OBART05G20480 Oryza barthii OBART05G20480 N 0.859
LPERR05G16310 Leersia perrieri LPERR05G16310 N 0.859
OGLUM05G21650 Oryza glumaepatula OGLUM05G21650 N 0.859
OB05G28010 Oryza brachyantha OB05G28010 N 0.837
OMERI05G18410 Oryza meridionalis OMERI05G18410 N 0.826
Traes_1BL_A8FC9D468 Triticum aestivum Traes_1BL_A8FC9D468 N 0.824
Traes_1DL_1806CFE5F Triticum aestivum Traes_1DL_1806CFE5F N 0.815
F775_06506 Aegilops tauschii F775_06506 N 0.815
Traes_1DL_1806CFE5F1 Triticum aestivum Traes_1DL_1806CFE5F1 N 0.815
TRIUR3_13028 Triticum urartu TRIUR3_13028 N 0.815
MLOC_14005 Hordeum vulgare MLOC_14005 N 0.807
Traes_1AL_C340A8E74 Triticum aestivum Traes_1AL_C340A8E74 N 0.804
GSMUA_AchrUn_randomG18890_001 Musa acuminata GSMUA_AchrUn_randomG18890_001 N 0.772
PDK_20s1595621g002 Phoenix dactylifera PDK_20s1595621g002 N 0.761
OLONG_007066 Oryza longistaminata OLONG_007066 N 0.727
Pm000222 Prunus mume Pm000222 N 0.725
Ca_15677 Cicer arietinum Ca_15677 N 0.717
evm.TU.supercontig_2.268 Carica papaya evm.TU.supercontig_2.268 N 0.707