Thhalv10012152m.g (Eutrema salsugineum)
B3

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF02362 (B3) IPR003340 Thhalv10012152m.g T024237_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
AT1G51120
M01696_2.00
Arabidopsis thaliana
NNNNYRNNNN

NNNNYRNNNN
PBM
Weirauch et al.(2014)
pTH8659
0.847 0.847
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Thhalv10012152m B3 184 292

Links

Other B3 family TFs
Other Eutrema salsugineum TFs

21 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
AT1G51120 Arabidopsis thaliana AT1G51120 D 0.865
AT1G50680 Arabidopsis thaliana AT1G50680 I 0.823
TCM_040397 Theobroma cacao TCM_040397 I 0.720
Traes_2DL_896E50180 Triticum aestivum Traes_2DL_896E50180 I 0.714
Bostr.26675s0076 Boechera stricta Bostr.26675s0076 I 0.878
Bostr.26675s0109 Boechera stricta Bostr.26675s0109 I 0.796
Cagra.2093s0004 Capsella grandiflora Cagra.2093s0004 I 0.765
Carubv10011257m.g Capsella rubella Carubv10011257m.g I 0.786
Carubv10011592m.g Capsella rubella Carubv10011592m.g I 0.765
Thhalv10012161m.g Eutrema salsugineum Thhalv10012161m.g I 0.776
fgenesh2_kg.1__4181__AT1G51120.1 Arabidopsis lyrata fgenesh2_kg.1__4181__AT1G51120.1 I 0.875
fgenesh2_kg.1__4154__AT1G50680.1 Arabidopsis lyrata fgenesh2_kg.1__4154__AT1G50680.1 I 0.835
Bo5g081270 Brassica oleracea Bo5g081270 I 0.750
Bo6g022280 Brassica oleracea Bo6g022280 I 0.758
Bo6g022450 Brassica oleracea Bo6g022450 I 0.777
Bo6g022460 Brassica oleracea Bo6g022460 I 0.734
Bo6g024770 Brassica oleracea Bo6g024770 I 0.804
Bra018854 Brassica rapa Bra018854 I 0.753
Bra018869 Brassica rapa Bra018869 I 0.774
Bra030458 Brassica rapa Bra030458 I 0.750
Thhalv10012356m.g Eutrema salsugineum Thhalv10012356m.g I 0.847