Thhalv10021075m.g (Eutrema salsugineum)
B3

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF02362 (B3) IPR003340 Thhalv10021075m.g T024261_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
VRN1
M06704_2.00
Arabidopsis thaliana
WWWTTTTTTTTTTTTTTTTTTTTTTTKTN

NAMAAAAAAAAAAAAAAAAAAAAAAAWWW
Dap-seq
OMalley et al.(2016)
VRN1_col_a
0.995 0.995
VRN1
M06705_2.00
Arabidopsis thaliana
NWBNTTTTTTTTTTTTKKB

VMMAAAAAAAAAAAANVWN
Dap-seq
OMalley et al.(2016)
VRN1_colamp_a
0.995 0.995
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Thhalv10021075m B3 5 98
Thhalv10021075m B3 244 338

Links

Other B3 family TFs
Other Eutrema salsugineum TFs

Invalid Input OrderBy

30 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action