Thhalv10028783m.g (Eutrema salsugineum)
B3

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF02362 (B3) IPR003340 Thhalv10028783m.g T024295_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
NGA4
M06707_2.00 		Arabidopsis thaliana
NHHBDYCAGGTRNHWH
DWDNYACCTGRHVDDN		 Dap-seq
OMalley et al.(2016)
NGA4_col_a 		0.779 0.779
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Thhalv10028783m B3 32 129

Links

Other B3 family TFs
Other Eutrema salsugineum TFs

15 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
NGA4 Arabidopsis lyrata scaffold_604140.1 I 0.859
Traes_2DL_896E50180 Triticum aestivum Traes_2DL_896E50180 I 0.857
Bra008552 Brassica rapa Bra008552 I 0.842
Bo00853s090 Brassica oleracea Bo00853s090 I 0.842
Bostr.7365s0004 Boechera stricta Bostr.7365s0004 I 0.824
OPUNC04G20430 Oryza punctata OPUNC04G20430 I 0.784
Cagra.23502s0003 Capsella grandiflora Cagra.23502s0003 I 0.779
Carubv10001406m.g Capsella rubella Carubv10001406m.g I 0.779
NGA4 Arabidopsis thaliana AT4G01500 D 0.779
Bra037417 Brassica rapa Bra037417 N 0.773
Bo9g004050 Brassica oleracea Bo9g004050 N 0.758
SapurV1A.0666s0090 Salix purpurea SapurV1A.0666s0090 I 0.757
Traes_2AL_41E2E66D9 Triticum aestivum Traes_2AL_41E2E66D9 I 0.742
OB10G24100 Oryza brachyantha OB10G24100 N 0.705
Ca_01368 Cicer arietinum Ca_01368 I 0.705