PK11025.1 (Cannabis sativa)
B3

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF02362 (B3) IPR003340 PK11025.1 T024338_2.00 Misc (2018-Jan-19)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
RAV1
M01646_2.00 		Arabidopsis thaliana
NCACCTGAHN
NDTCAGGTGN		 PBM
Weirauch et al.(2014)
pTH8592 		0.713 0.713
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
PK11025.1 B3 61 164

Links

Other B3 family TFs
Other Cannabis sativa TFs

283 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
PRUPE_ppa019131mg Prunus persica PRUPE_ppa019131mg I 0.960
PGSC0003DMG400012222 Solanum tuberosum PGSC0003DMG400012222 I 0.960
Eucgr.L00348 Eucalyptus grandis Eucgr.L00348 I 0.960
Pm024248 Prunus mume Pm024248 I 0.960
TCM_015590 Theobroma cacao TCM_015590 I 0.951
TCM_005014 Theobroma cacao TCM_005014 I 0.941
Gorai.003G073600 Gossypium raimondii Gorai.003G073600 I 0.941
gene01855-v1.0-hybrid Fragaria vesca gene01855-v1.0-hybrid I 0.941
Solyc08g083400.2 Solanum lycopersicum Solyc08g083400.2 I 0.941
30076.m004471 Ricinus communis 30076.m004471 I 0.931
VIT_02s0025g03000 Vitis vinifera VIT_02s0025g03000 I 0.931
evm.TU.supercontig_37.108 Carica papaya evm.TU.supercontig_37.108 I 0.931
evm.TU.supercontig_57.71 Carica papaya evm.TU.supercontig_57.71 I 0.931
Gorai.001G150200 Gossypium raimondii Gorai.001G150200 I 0.931
SapurV1A.0003s0340 Salix purpurea SapurV1A.0003s0340 I 0.931
POPTR_0011s15270 Populus trichocarpa POPTR_0011s15270 I 0.921
POPTR_0002s18260 Populus trichocarpa POPTR_0002s18260 N 0.921
Gorai.007G114200 Gossypium raimondii Gorai.007G114200 I 0.921
cassava29779.valid.m1 Manihot esculenta cassava29779.valid.m1 I 0.921
POPTR_0014s10290 Populus trichocarpa POPTR_0014s10290 I 0.921
SapurV1A.0162s0420 Salix purpurea SapurV1A.0162s0420 I 0.921
orange1.1g013565m.g Citrus sinensis orange1.1g013565m.g I 0.911
SapurV1A.0285s0040 Salix purpurea SapurV1A.0285s0040 I 0.911
Ciclev10020450m.g Citrus clementina Ciclev10020450m.g I 0.911
LjT15D16.50.nc Lotus japonicus LjT15D16.50.nc I 0.911
orange1.1g015743m.g Citrus sinensis orange1.1g015743m.g I 0.911
Ciclev10020034m.g Citrus clementina Ciclev10020034m.g I 0.911
GLYMA16G01951 Glycine max GLYMA16G01951 I 0.901
GLYMA07G05381 Glycine max GLYMA07G05381 I 0.901
cassava36125.valid.m1 Manihot esculenta cassava36125.valid.m1 I 0.901
chr1.CM0105.800.nc Lotus japonicus chr1.CM0105.800.nc I 0.901
PGSC0003DMG400005857 Solanum tuberosum PGSC0003DMG400005857 I 0.901
MTR_8g023990 Medicago truncatula MTR_8g023990 I 0.901
Solyc08g013690.1 Solanum lycopersicum Solyc08g013690.1 I 0.901
PGSC0003DMG400005856 Solanum tuberosum PGSC0003DMG400005856 I 0.901
GLYMA03G42301 Glycine max GLYMA03G42301 I 0.901
Gorai.004G128200 Gossypium raimondii Gorai.004G128200 N 0.901
POPTR_0001s45650 Populus trichocarpa POPTR_0001s45650 I 0.901
MTR_7g117455 Medicago truncatula MTR_7g117455 I 0.901
Solyc08g013700.1 Solanum lycopersicum Solyc08g013700.1 I 0.891
mgf023769m Mimulus guttatus mgf023769m N 0.891
GLYMA19G45090 Glycine max GLYMA19G45090 I 0.891
Eucgr.E01093 Eucalyptus grandis Eucgr.E01093 I 0.891
Gorai.008G261100 Gossypium raimondii Gorai.008G261100 I 0.891
VIT_15s0048g02370 Vitis vinifera VIT_15s0048g02370 I 0.881
OB03G11610 Oryza brachyantha OB03G11610 N 0.881
Ca_01368 Cicer arietinum Ca_01368 I 0.881
gene18594-v1.0-hybrid Fragaria vesca gene18594-v1.0-hybrid I 0.881
Bra004501 Brassica rapa Bra004501 N 0.881
Aquca_037_00291 Aquilegia coerulea Aquca_037_00291 I 0.881
Bra040478 Brassica rapa Bra040478 I 0.881
Bostr.25993s0080 Boechera stricta Bostr.25993s0080 N 0.881
LPERR03G01560 Leersia perrieri LPERR03G01560 N 0.881
Gorai.008G132400 Gossypium raimondii Gorai.008G132400 I 0.871
Si036864m.g Setaria italica Si036864m.g N 0.871
BGIOSGA011738 Oryza indica BGIOSGA011738 N 0.871
OGLUM03G01630 Oryza glumaepatula OGLUM03G01630 N 0.871
Bo3g039420 Brassica oleracea Bo3g039420 N 0.871
OBART03G01650 Oryza barthii OBART03G01650 N 0.871
OMERI03G01600 Oryza meridionalis OMERI03G01600 N 0.871
Sb01g049150 Sorghum bicolor Sb01g049150 N 0.871
Bra000434 Brassica rapa Bra000434 N 0.871
ORGLA03G0014300 Oryza glaberrima ORGLA03G0014300 N 0.871
fgenesh2_kg.4__2914__AT2G46870.1 Arabidopsis lyrata fgenesh2_kg.4__2914__AT2G46870.1 N 0.871
fgenesh2_kg.181__3__AT2G46870.1 Arabidopsis lyrata fgenesh2_kg.181__3__AT2G46870.1 N 0.871
Cagra.0050s0013 Capsella grandiflora Cagra.0050s0013 N 0.871
Carubv10023656m.g Capsella rubella Carubv10023656m.g N 0.871
OPUNC03G01540 Oryza punctata OPUNC03G01540 N 0.871
NGA1 Arabidopsis thaliana AT2G46870 N 0.871
ONIVA02G30750 Oryza nivara ONIVA02G30750 N 0.871
OS03G0120900 Oryza sativa OS03G0120900 N 0.871
Bo4g006900 Brassica oleracea Bo4g006900 N 0.871
PK21157.1 Cannabis sativa PK21157.1 I 0.861
OB02G35380 Oryza brachyantha OB02G35380 I 0.861
Thhalv10001555m.g Eutrema salsugineum Thhalv10001555m.g N 0.861
Pavir.Ib00059 Panicum virgatum Pavir.Ib00059 N 0.861
Pavir.Ia04549 Panicum virgatum Pavir.Ia04549 N 0.861
Bo4g197410 Brassica oleracea Bo4g197410 I 0.861
Bo6g079210 Brassica oleracea Bo6g079210 N 0.861
Cucsa.106780 Cucumis sativus Cucsa.106780 N 0.861
Traes_4DL_A83084AC1 Triticum aestivum Traes_4DL_A83084AC1 N 0.861
Cla014858 Citrullus lanatus Cla014858 N 0.861
MLOC_66387 Hordeum vulgare MLOC_66387 I 0.851
30068.m002615 Ricinus communis 30068.m002615 I 0.851
Pm028725 Prunus mume Pm028725 N 0.851
OGLUM04G22780 Oryza glumaepatula OGLUM04G22780 I 0.851
ONIVA04G22030 Oryza nivara ONIVA04G22030 I 0.851
OS04G0581400 Oryza sativa OS04G0581400 I 0.851
ORGLA04G0198400 Oryza glaberrima ORGLA04G0198400 I 0.851
BRADI5G19260 Brachypodium distachyon BRADI5G19260 I 0.851
Bra007646 Brassica rapa Bra007646 N 0.851
BGIOSGA014498 Oryza indica BGIOSGA014498 I 0.851
Bo8g097490 Brassica oleracea Bo8g097490 N 0.851
LPERR02G22870 Leersia perrieri LPERR02G22870 I 0.851
Traes_6AL_44AA5642C Triticum aestivum Traes_6AL_44AA5642C I 0.851
Traes_6DL_359607E93 Triticum aestivum Traes_6DL_359607E93 I 0.851
OBART04G22880 Oryza barthii OBART04G22880 I 0.851
OS02G0683500 Oryza sativa OS02G0683500 N 0.842
Carubv10009540m.g Capsella rubella Carubv10009540m.g N 0.842
Traes_4BL_D9784B20C1 Triticum aestivum Traes_4BL_D9784B20C1 N 0.842
ORUFI02G29620 Oryza rufipogon ORUFI02G29620 N 0.842
Bostr.5325s0023 Boechera stricta Bostr.5325s0023 N 0.842
Traes_2BL_439C794F5 Triticum aestivum Traes_2BL_439C794F5 N 0.842
Cagra.1968s0048 Capsella grandiflora Cagra.1968s0048 N 0.842
Si011823m.g Setaria italica Si011823m.g N 0.842
PRUPE_ppa015999mg Prunus persica PRUPE_ppa015999mg N 0.842
Thhalv10008068m.g Eutrema salsugineum Thhalv10008068m.g N 0.842
cassava39049.m1 Manihot esculenta cassava39049.m1 I 0.842
Pavir.J38226 Panicum virgatum Pavir.J38226 N 0.842
ORGLA02G0241100 Oryza glaberrima ORGLA02G0241100 N 0.842
Pavir.Ga00960 Panicum virgatum Pavir.Ga00960 N 0.842
Sb06g026370 Sorghum bicolor Sb06g026370 N 0.842
OGLUM02G28660 Oryza glumaepatula OGLUM02G28660 N 0.842
Bra014415 Brassica rapa Bra014415 N 0.842
LPERR04G18630 Leersia perrieri LPERR04G18630 N 0.842
GRMZM2G018485 Zea mays GRMZM2G018485 N 0.842
NGA3 Arabidopsis lyrata fgenesh2_kg.1__134__AT1G01030.1 N 0.842
OMERI02G27240 Oryza meridionalis OMERI02G27240 N 0.842
ONIVA12G15340 Oryza nivara ONIVA12G15340 N 0.842
OPUNC02G25780 Oryza punctata OPUNC02G25780 N 0.842
NGA3 Arabidopsis thaliana AT1G01030 N 0.842
BGIOSGA005835 Oryza indica BGIOSGA005835 N 0.842
OBART02G28100 Oryza barthii OBART02G28100 N 0.842
GRMZM2G098443 Zea mays GRMZM2G098443 N 0.842
GRMZM2G082227 Zea mays GRMZM2G082227 N 0.832
Cla006845 Citrullus lanatus Cla006845 I 0.832
Bostr.13158s0202 Boechera stricta Bostr.13158s0202 N 0.832
GRMZM2G102059 Zea mays GRMZM2G102059 N 0.832
BRADI1G77150 Brachypodium distachyon BRADI1G77150 N 0.832
MDP0000138163 Malus domestica MDP0000138163 N 0.832
Bo4g099000 Brassica oleracea Bo4g099000 N 0.832
Thhalv10006123m.g Eutrema salsugineum Thhalv10006123m.g I 0.832
Bo5g002790 Brassica oleracea Bo5g002790 N 0.832
Bra003482 Brassica rapa Bra003482 N 0.832
Cagra.0483s0046 Capsella grandiflora Cagra.0483s0046 I 0.832
Bra030497 Brassica rapa Bra030497 N 0.832
NGA2 Arabidopsis lyrata fgenesh2_kg.5__2696__AT3G61970.1 N 0.832
Cucsa.349830 Cucumis sativus Cucsa.349830 N 0.832
GSMUA_Achr4G26430_001 Musa acuminata GSMUA_Achr4G26430_001 I 0.822
Cucsa.193290 Cucumis sativus Cucsa.193290 I 0.822
Carubv10017696m.g Capsella rubella Carubv10017696m.g I 0.822
NGA2 Arabidopsis thaliana AT3G61970 N 0.822
Bo3g001110 Brassica oleracea Bo3g001110 N 0.822
Traes_4DL_D0F3E9568 Triticum aestivum Traes_4DL_D0F3E9568 N 0.812
MDP0000288808 Malus domestica MDP0000288808 N 0.812
Bra033294 Brassica rapa Bra033294 N 0.812
GRMZM2G024948 Zea mays GRMZM2G024948 N 0.802
Sb04g031710 Sorghum bicolor Sb04g031710 N 0.802
Cla005055 Citrullus lanatus Cla005055 N 0.802
Pavir.Aa00929 Panicum virgatum Pavir.Aa00929 N 0.802
TRIUR3_29732 Triticum urartu TRIUR3_29732 N 0.782
GSMUA_Achr5G20340_001 Musa acuminata GSMUA_Achr5G20340_001 N 0.782
ORUFI04G24570 Oryza rufipogon ORUFI04G24570 I 0.782
Traes_2AL_41E2E66D9 Triticum aestivum Traes_2AL_41E2E66D9 I 0.782
ORUFI10G18030 Oryza rufipogon ORUFI10G18030 N 0.772
ORGLA10G0119700 Oryza glaberrima ORGLA10G0119700 N 0.772
LPERR10G12990 Leersia perrieri LPERR10G12990 N 0.772
BGIOSGA031489 Oryza indica BGIOSGA031489 N 0.772
OMERI10G13480 Oryza meridionalis OMERI10G13480 N 0.772
Pavir.J27608 Panicum virgatum Pavir.J27608 N 0.772
OPUNC10G16940 Oryza punctata OPUNC10G16940 N 0.772
OS10G0537100 Oryza sativa OS10G0537100 N 0.772
Si020241m.g Setaria italica Si020241m.g N 0.772
OGLUM10G17040 Oryza glumaepatula OGLUM10G17040 N 0.772
ONIVA10G18740 Oryza nivara ONIVA10G18740 N 0.772
Solyc09g010230.1 Solanum lycopersicum Solyc09g010230.1 N 0.772
OBART10G17010 Oryza barthii OBART10G17010 N 0.772
Bostr.13129s0349 Boechera stricta Bostr.13129s0349 N 0.762
Carubv10001689m.g Capsella rubella Carubv10001689m.g I 0.762
fgenesh2_kg.6__566__AT5G06250.2 Arabidopsis lyrata fgenesh2_kg.6__566__AT5G06250.2 N 0.762
GLYMA02G36090 Glycine max GLYMA02G36090 I 0.762
Cagra.2117s0038 Capsella grandiflora Cagra.2117s0038 I 0.762
Pavir.Ab02711 Panicum virgatum Pavir.Ab02711 I 0.762
PGSC0003DMG400008936 Solanum tuberosum PGSC0003DMG400008936 N 0.762
orange1.1g019261m.g Citrus sinensis orange1.1g019261m.g I 0.762
VIT_08s0007g02810 Vitis vinifera VIT_08s0007g02810 N 0.762
Ciclev10012008m.g Citrus clementina Ciclev10012008m.g I 0.762
TCM_022729 Theobroma cacao TCM_022729 N 0.762
AT5G06250 Arabidopsis thaliana AT5G06250 N 0.762
Si039972m.g Setaria italica Si039972m.g N 0.762
Cagra.1655s0012 Capsella grandiflora Cagra.1655s0012 N 0.752
Thhalv10017156m.g Eutrema salsugineum Thhalv10017156m.g N 0.752
AMTR_s00114p00142630 Amborella trichopoda AMTR_s00114p00142630 I 0.752
Bostr.23794s0488 Boechera stricta Bostr.23794s0488 N 0.752
cassava3990.m1 Manihot esculenta cassava3990.m1 N 0.752
mgf019085m Mimulus guttatus mgf019085m N 0.752
Cagra.0993s0119 Capsella grandiflora Cagra.0993s0119 N 0.752
Bostr.19424s1090 Boechera stricta Bostr.19424s1090 N 0.752
gene15627-v1.0-hybrid Fragaria vesca gene15627-v1.0-hybrid I 0.752
Thhalv10015675m.g Eutrema salsugineum Thhalv10015675m.g I 0.752
Bra017262 Brassica rapa Bra017262 N 0.752
Gorai.002G237900 Gossypium raimondii Gorai.002G237900 I 0.752
AT3G11580 Arabidopsis thaliana AT3G11580 N 0.752
Carubv10014376m.g Capsella rubella Carubv10014376m.g N 0.752
Pavir.J06582 Panicum virgatum Pavir.J06582 N 0.752
GSMUA_Achr1G03600_001 Musa acuminata GSMUA_Achr1G03600_001 I 0.752
Carubv10023925m.g Capsella rubella Carubv10023925m.g N 0.752
Pavir.J35382 Panicum virgatum Pavir.J35382 N 0.752
AMTR_s00018p00040300 Amborella trichopoda AMTR_s00018p00040300 N 0.752
TRIUR3_06598 Triticum urartu TRIUR3_06598 N 0.752
GRMZM2G142999 Zea mays GRMZM2G142999 N 0.752
evm.TU.contig_29173.1 Carica papaya evm.TU.contig_29173.1 I 0.752
Gorai.009G399000 Gossypium raimondii Gorai.009G399000 N 0.752
scaffold_301330.1 Arabidopsis lyrata scaffold_301330.1 N 0.752
cassava19218.valid.m1 Manihot esculenta cassava19218.valid.m1 N 0.752
F775_04153 Aegilops tauschii F775_04153 N 0.743
Bra001411 Brassica rapa Bra001411 N 0.743
Bo9g176470 Brassica oleracea Bo9g176470 N 0.743
POPTR_0016s07540 Populus trichocarpa POPTR_0016s07540 N 0.743
MLOC_74058 Hordeum vulgare MLOC_74058 N 0.743
SapurV1A.1586s0010 Salix purpurea SapurV1A.1586s0010 N 0.743
30032.m000462 Ricinus communis 30032.m000462 N 0.743
PK04952.1 Cannabis sativa PK04952.1 I 0.743
Bo01079s020 Brassica oleracea Bo01079s020 N 0.743
Thhalv10021305m.g Eutrema salsugineum Thhalv10021305m.g N 0.743
SapurV1A.0974s0140 Salix purpurea SapurV1A.0974s0140 N 0.743
scaffold_402221.1 Arabidopsis lyrata scaffold_402221.1 N 0.743
Aquca_072_00063 Aquilegia coerulea Aquca_072_00063 I 0.743
Bo3g064320 Brassica oleracea Bo3g064320 N 0.743
mgf023686m Mimulus guttatus mgf023686m I 0.743
ARF31 Arabidopsis thaliana AT2G36080 N 0.743
Sb01g030520 Sorghum bicolor Sb01g030520 N 0.743
OLONG_000415 Oryza longistaminata OLONG_000415 I 0.742
Traes_1AL_29F610E15 Triticum aestivum Traes_1AL_29F610E15 N 0.733
MTR_1g058350 Medicago truncatula MTR_1g058350 N 0.733
MTR_7g105370 Medicago truncatula MTR_7g105370 N 0.733
Bra005301 Brassica rapa Bra005301 N 0.733
GSMUA_Achr6G13140_001 Musa acuminata GSMUA_Achr6G13140_001 N 0.733
Bo4g035110 Brassica oleracea Bo4g035110 N 0.733
GLYMA10G08871 Glycine max GLYMA10G08871 I 0.733
Ca_25633 Cicer arietinum Ca_25633 I 0.733
Cla017937 Citrullus lanatus Cla017937 I 0.733
Traes_2BL_5ECD53274 Triticum aestivum Traes_2BL_5ECD53274 N 0.727
SapurV1A.1211s0020 Salix purpurea SapurV1A.1211s0020 N 0.723
Pavir.Ca00165 Panicum virgatum Pavir.Ca00165 N 0.723
Bo3g003800 Brassica oleracea Bo3g003800 N 0.723
Lus10034276.g Linum usitatissimum Lus10034276.g I 0.723
Pavir.Cb02052 Panicum virgatum Pavir.Cb02052 N 0.723
PGSC0003DMG400028159 Solanum tuberosum PGSC0003DMG400028159 N 0.723
GRMZM2G125095 Zea mays GRMZM2G125095 N 0.723
Bra005886 Brassica rapa Bra005886 N 0.723
POPTR_0006s22460 Populus trichocarpa POPTR_0006s22460 N 0.723
PRUPE_ppa019539mg Prunus persica PRUPE_ppa019539mg I 0.723
TRIUR3_01515 Triticum urartu TRIUR3_01515 N 0.723
Si027632m.g Setaria italica Si027632m.g N 0.723
Solyc10g083210.1 Solanum lycopersicum Solyc10g083210.1 N 0.723
Cucsa.241440 Cucumis sativus Cucsa.241440 I 0.723
OB12G13420 Oryza brachyantha OB12G13420 N 0.723
OMERI12G01740 Oryza meridionalis OMERI12G01740 N 0.723
MDP0000229742 Malus domestica MDP0000229742 N 0.713
Ca_00826 Cicer arietinum Ca_00826 N 0.713
Bra034828 Brassica rapa Bra034828 N 0.713
Bo5g136360 Brassica oleracea Bo5g136360 N 0.713
Eucgr.A02625 Eucalyptus grandis Eucgr.A02625 N 0.713
GSMUA_Achr6G35600_001 Musa acuminata GSMUA_Achr6G35600_001 N 0.713
Gorai.006G152400 Gossypium raimondii Gorai.006G152400 N 0.713
Traes_5BL_B98E347A8 Triticum aestivum Traes_5BL_B98E347A8 N 0.713
Traes_5DL_CACDF70D6 Triticum aestivum Traes_5DL_CACDF70D6 N 0.713
Lus10021326.g Linum usitatissimum Lus10021326.g N 0.713
GSMUA_Achr4G30170_001 Musa acuminata GSMUA_Achr4G30170_001 N 0.713
OB05G32250 Oryza brachyantha OB05G32250 I 0.713
OPUNC12G03300 Oryza punctata OPUNC12G03300 N 0.713
mgf018965m Mimulus guttatus mgf018965m N 0.713
MLOC_47091 Hordeum vulgare MLOC_47091 N 0.703
OPUNC07G09160 Oryza punctata OPUNC07G09160 N 0.703
MLOC_44012 Hordeum vulgare MLOC_44012 I 0.703
MLOC_38822 Hordeum vulgare MLOC_38822 I 0.703
MLOC_56530 Hordeum vulgare MLOC_56530 N 0.703
Sb05g003450 Sorghum bicolor Sb05g003450 N 0.703
Carubv10010429m.g Capsella rubella Carubv10010429m.g I 0.703
LjSGA_011266.1 Lotus japonicus LjSGA_011266.1 N 0.703
Traes_1BL_60A56C455 Triticum aestivum Traes_1BL_60A56C455 I 0.703
OPUNC11G03320 Oryza punctata OPUNC11G03320 N 0.703
MLOC_11014 Hordeum vulgare MLOC_11014 N 0.703
Bra041023 Brassica rapa Bra041023 N 0.703
GRMZM5G805685 Zea mays GRMZM5G805685 N 0.703
Pavir.Ha01761 Panicum virgatum Pavir.Ha01761 N 0.703
BRADI4G25170 Brachypodium distachyon BRADI4G25170 N 0.703
Cagra.11546s0001 Capsella grandiflora Cagra.11546s0001 I 0.703
Pavir.Hb01814 Panicum virgatum Pavir.Hb01814 N 0.703
Traes_2DL_2128A95BD Triticum aestivum Traes_2DL_2128A95BD N 0.703
BRADI4G42167 Brachypodium distachyon BRADI4G42167 N 0.703
Traes_1BL_F14523046 Triticum aestivum Traes_1BL_F14523046 I 0.703