PK13064.1 (Cannabis sativa)
B3

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF02362 (B3) IPR003340 PK13064.1 T024342_2.00 Misc (2018-Jan-19)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
ARF16
M06708_2.00
Arabidopsis thaliana
TTTACGKTTTTGGCGGRAAAA

TTTTYCCGCCAAAAMCGTAAA
Dap-seq
OMalley et al.(2016)
ARF16_col_b
0.876 0.876
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
PK13064.1 B3 162 264

Links

Other B3 family TFs
Other Cannabis sativa TFs

211 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
TCM_042067 Theobroma cacao TCM_042067 I 0.928
GSMUA_Achr4G18240_001 Musa acuminata GSMUA_Achr4G18240_001 I 0.918
GRMZM2G159399 Zea mays GRMZM2G159399 I 0.918
MDP0000221322 Malus domestica MDP0000221322 I 0.918
evm.TU.supercontig_65.4 Carica papaya evm.TU.supercontig_65.4 I 0.918
ARF10 Vitis vinifera VIT_06s0004g02750 I 0.918
Pm031275 Prunus mume Pm031275 I 0.918
SapurV1A.0216s0160 Salix purpurea SapurV1A.0216s0160 I 0.918
MDP0000131481 Malus domestica MDP0000131481 I 0.918
Eucgr.J00923 Eucalyptus grandis Eucgr.J00923 I 0.918
GLYMA12G29720 Glycine max GLYMA12G29720 I 0.907
PRUPE_ppa002082mg Prunus persica PRUPE_ppa002082mg I 0.907
POPTR_0848s00200 Populus trichocarpa POPTR_0848s00200 I 0.907
POPTR_0008s03890 Populus trichocarpa POPTR_0008s03890 I 0.907
GSMUA_Achr11G22870_001 Musa acuminata GSMUA_Achr11G22870_001 I 0.907
OB10G20590 Oryza brachyantha OB10G20590 I 0.907
MLOC_64795 Hordeum vulgare MLOC_64795 I 0.907
LPERR10G09970 Leersia perrieri LPERR10G09970 I 0.907
Sb01g019130 Sorghum bicolor Sb01g019130 I 0.907
POPTR_0004s22130 Populus trichocarpa POPTR_0004s22130 I 0.907
POPTR_0010s23000 Populus trichocarpa POPTR_0010s23000 I 0.907
TCM_043157 Theobroma cacao TCM_043157 I 0.907
Solyc11g069500.1 Solanum lycopersicum Solyc11g069500.1 I 0.907
27538.m000327 Ricinus communis 27538.m000327 I 0.907
cassava37879.valid.m1 Manihot esculenta cassava37879.valid.m1 I 0.907
cassava852.valid.m1 Manihot esculenta cassava852.valid.m1 I 0.907
BRADI3G28950 Brachypodium distachyon BRADI3G28950 I 0.907
Aquca_030_00152 Aquilegia coerulea Aquca_030_00152 I 0.907
gene16844-v1.0-hybrid Fragaria vesca gene16844-v1.0-hybrid I 0.907
Si034525m.g Setaria italica Si034525m.g I 0.907
OPUNC06G22960 Oryza punctata OPUNC06G22960 I 0.897
ORGLA06G0209500 Oryza glaberrima ORGLA06G0209500 I 0.897
OGLUM06G26560 Oryza glumaepatula OGLUM06G26560 I 0.897
Pavir.J26437 Panicum virgatum Pavir.J26437 I 0.897
orange1.1g005482m.g Citrus sinensis orange1.1g005482m.g I 0.897
ONIVA06G28270 Oryza nivara ONIVA06G28270 I 0.897
ORGLA10G0115500 Oryza glaberrima ORGLA10G0115500 I 0.897
OGLUM10G13220 Oryza glumaepatula OGLUM10G13220 I 0.897
OMERI06G25370 Oryza meridionalis OMERI06G25370 I 0.897
OMERI10G10210 Oryza meridionalis OMERI10G10210 I 0.897
Cucsa.386060 Cucumis sativus Cucsa.386060 I 0.897
ONIVA10G14700 Oryza nivara ONIVA10G14700 I 0.897
ORUFI10G14150 Oryza rufipogon ORUFI10G14150 I 0.897
Lus10019940.g Linum usitatissimum Lus10019940.g I 0.897
OBART10G13410 Oryza barthii OBART10G13410 I 0.897
Si005991m.g Setaria italica Si005991m.g I 0.897
Lus10026510.g Linum usitatissimum Lus10026510.g I 0.897
AC207656.3_FG002 Zea mays AC207656.3_FG002 I 0.897
ARF22 Oryza sativa OS10G0479900 I 0.897
Gorai.009G107800 Gossypium raimondii Gorai.009G107800 I 0.897
Sb10g027790 Sorghum bicolor Sb10g027790 I 0.897
mgf016139m Mimulus guttatus mgf016139m I 0.897
ARF18 Oryza sativa OS06G0685700 I 0.897
Cla008883 Citrullus lanatus Cla008883 I 0.897
ORUFI06G27120 Oryza rufipogon ORUFI06G27120 I 0.897
OPUNC10G11840 Oryza punctata OPUNC10G11840 I 0.897
GRMZM2G153233 Zea mays GRMZM2G153233 I 0.897
GSMUA_Achr8G18930_001 Musa acuminata GSMUA_Achr8G18930_001 I 0.897
SapurV1A.0518s0120 Salix purpurea SapurV1A.0518s0120 I 0.897
GLYMA13G40030 Glycine max GLYMA13G40030 I 0.897
OBART06G25230 Oryza barthii OBART06G25230 I 0.897
BRADI1G33160 Brachypodium distachyon BRADI1G33160 I 0.897
F775_32978 Aegilops tauschii F775_32978 I 0.897
Bra011955 Brassica rapa Bra011955 I 0.897
Ciclev10030860m.g Citrus clementina Ciclev10030860m.g I 0.897
BGIOSGA033142 Oryza indica BGIOSGA033142 I 0.897
chr3.LjT10E18.60.nc Lotus japonicus chr3.LjT10E18.60.nc I 0.897
OB06G32920 Oryza brachyantha OB06G32920 I 0.897
PGSC0003DMG400008081 Solanum tuberosum PGSC0003DMG400008081 I 0.896
Ca_02541 Cicer arietinum Ca_02541 I 0.887
Ciclev10011194m.g Citrus clementina Ciclev10011194m.g I 0.887
PRUPE_ppa002195mg Prunus persica PRUPE_ppa002195mg I 0.887
Bo4g071620 Brassica oleracea Bo4g071620 I 0.887
Carubv10022755m.g Capsella rubella Carubv10022755m.g I 0.887
PRUPE_ppa002710mg Prunus persica PRUPE_ppa002710mg I 0.887
gene09733-v1.0-hybrid Fragaria vesca gene09733-v1.0-hybrid I 0.887
GLYMA11G20490 Glycine max GLYMA11G20490 I 0.887
ARF10 Arabidopsis lyrata fgenesh2_kg.4__731__AT2G28350.1 I 0.887
Ciclev10027901m.g Citrus clementina Ciclev10027901m.g I 0.887
Bostr.27991s0089 Boechera stricta Bostr.27991s0089 I 0.887
Cagra.1876s0007 Capsella grandiflora Cagra.1876s0007 I 0.887
Cucsa.124410 Cucumis sativus Cucsa.124410 I 0.887
Bra011162 Brassica rapa Bra011162 I 0.887
GLYMA12G08110 Glycine max GLYMA12G08110 I 0.887
PGSC0003DMG400021560 Solanum tuberosum PGSC0003DMG400021560 I 0.887
PK17007.1 Cannabis sativa PK17007.1 I 0.887
Pm030120 Prunus mume Pm030120 I 0.887
Thhalv10016329m.g Eutrema salsugineum Thhalv10016329m.g I 0.887
cassava23558.valid.m1 Manihot esculenta cassava23558.valid.m1 I 0.887
MTR_2g094570 Medicago truncatula MTR_2g094570 I 0.887
cassava5984.valid.m1 Manihot esculenta cassava5984.valid.m1 I 0.887
Pavir.Da00107 Panicum virgatum Pavir.Da00107 I 0.887
SapurV1A.0657s0050 Salix purpurea SapurV1A.0657s0050 I 0.887
orange1.1g005075m.g Citrus sinensis orange1.1g005075m.g I 0.887
Eucgr.G02838 Eucalyptus grandis Eucgr.G02838 I 0.887
orange1.1g004896m.g Citrus sinensis orange1.1g004896m.g I 0.887
Solyc09g007810.2 Solanum lycopersicum Solyc09g007810.2 I 0.887
Cla018574 Citrullus lanatus Cla018574 I 0.887
Pavir.Ia01695 Panicum virgatum Pavir.Ia01695 I 0.884
Bo1g014600 Brassica oleracea Bo1g014600 I 0.876
Bostr.7867s0859 Boechera stricta Bostr.7867s0859 I 0.876
ARF10 Arabidopsis thaliana AT2G28350 I 0.876
TCM_022163 Theobroma cacao TCM_022163 I 0.876
evm.TU.supercontig_53.88 Carica papaya evm.TU.supercontig_53.88 I 0.876
30078.m002329 Ricinus communis 30078.m002329 I 0.876
ARF16 Vitis vinifera VIT_13s0019g04380 I 0.876
Pm018533 Prunus mume Pm018533 I 0.876
Bo7g114200 Brassica oleracea Bo7g114200 I 0.876
Ca_26121 Cicer arietinum Ca_26121 I 0.876
Gorai.006G166400 Gossypium raimondii Gorai.006G166400 I 0.876
VIT_08s0040g01810 Vitis vinifera VIT_08s0040g01810 I 0.876
ARF16 Arabidopsis thaliana AT4G30080 D 0.876
GLYMA10G35481 Glycine max GLYMA10G35481 I 0.876
MTR_4g058930 Medicago truncatula MTR_4g058930 I 0.876
Sb04g026610 Sorghum bicolor Sb04g026610 I 0.876
Carubv10004220m.g Capsella rubella Carubv10004220m.g I 0.876
GRMZM2G081406 Zea mays GRMZM2G081406 I 0.876
MLOC_77438 Hordeum vulgare MLOC_77438 I 0.876
MTR_1g094960 Medicago truncatula MTR_1g094960 I 0.876
ARF16 Arabidopsis lyrata scaffold_701217.1 I 0.876
GLYMA13G20382 Glycine max GLYMA13G20382 I 0.876
Thhalv10024601m.g Eutrema salsugineum Thhalv10024601m.g I 0.876
Si016509m.g Setaria italica Si016509m.g I 0.876
Lus10021467.g Linum usitatissimum Lus10021467.g I 0.876
Cagra.1744s0020 Capsella grandiflora Cagra.1744s0020 I 0.876
BRADI3G49320 Brachypodium distachyon BRADI3G49320 I 0.875
OGLUM02G25270 Oryza glumaepatula OGLUM02G25270 I 0.866
MTR_1g064430 Medicago truncatula MTR_1g064430 I 0.866
SapurV1A.0049s0400 Salix purpurea SapurV1A.0049s0400 I 0.866
BGIOSGA008657 Oryza indica BGIOSGA008657 I 0.866
Gorai.003G142500 Gossypium raimondii Gorai.003G142500 I 0.866
OPUNC02G22610 Oryza punctata OPUNC02G22610 I 0.866
OMERI02G24320 Oryza meridionalis OMERI02G24320 I 0.866
ONIVA02G27180 Oryza nivara ONIVA02G27180 I 0.866
gene23280-v1.0-hybrid Fragaria vesca gene23280-v1.0-hybrid I 0.866
Cucsa.137650 Cucumis sativus Cucsa.137650 I 0.866
27494.m000045 Ricinus communis 27494.m000045 I 0.866
ARF8 Oryza sativa OS02G0628600 I 0.866
GLYMA10G06080 Glycine max GLYMA10G06080 I 0.866
POPTR_0016s09150 Populus trichocarpa POPTR_0016s09150 I 0.866
Gorai.012G004800 Gossypium raimondii Gorai.012G004800 I 0.866
Bra024109 Brassica rapa Bra024109 I 0.866
Lus10016091.g Linum usitatissimum Lus10016091.g I 0.866
GLYMA20G32040 Glycine max GLYMA20G32040 I 0.866
mgf024607m Mimulus guttatus mgf024607m I 0.866
ORGLA02G0215100 Oryza glaberrima ORGLA02G0215100 I 0.866
ORUFI02G26180 Oryza rufipogon ORUFI02G26180 I 0.866
LPERR02G20290 Leersia perrieri LPERR02G20290 I 0.866
Eucgr.K01240 Eucalyptus grandis Eucgr.K01240 I 0.866
mgf005300m Mimulus guttatus mgf005300m I 0.866
MDP0000750392 Malus domestica MDP0000750392 I 0.856
mgf000336m Mimulus guttatus mgf000336m I 0.856
OLONG_021130 Oryza longistaminata OLONG_021130 I 0.856
OLONG_000617 Oryza longistaminata OLONG_000617 I 0.856
LPERR06G21020 Leersia perrieri LPERR06G21020 I 0.856
SapurV1A.0986s0010 Salix purpurea SapurV1A.0986s0010 I 0.856
Gorai.013G267100 Gossypium raimondii Gorai.013G267100 I 0.856
Ca_17136 Cicer arietinum Ca_17136 I 0.856
Cla013979 Citrullus lanatus Cla013979 I 0.856
Gorai.011G238900 Gossypium raimondii Gorai.011G238900 I 0.856
GLYMA19G36571 Glycine max GLYMA19G36571 I 0.856
OB02G32150 Oryza brachyantha OB02G32150 I 0.856
GRMZM2G390641 Zea mays GRMZM2G390641 I 0.845
POPTR_0006s12930 Populus trichocarpa POPTR_0006s12930 I 0.845
SapurV1A.0141s0090 Salix purpurea SapurV1A.0141s0090 I 0.845
AMTR_s00155p00082980 Amborella trichopoda AMTR_s00155p00082980 I 0.835
Lus10023519.g Linum usitatissimum Lus10023519.g I 0.835
Lus10040403.g Linum usitatissimum Lus10040403.g I 0.835
Traes_6DL_52A25BEA4 Triticum aestivum Traes_6DL_52A25BEA4 I 0.833
SELMODRAFT_443304 Selaginella moellendorffii SELMODRAFT_443304 I 0.825
SELMODRAFT_444549 Selaginella moellendorffii SELMODRAFT_444549 I 0.825
e_gw1.279.55.1 Physcomitrella patens e_gw1.279.55.1 I 0.825
estExt_fgenesh1_pm.C_3390006 Physcomitrella patens estExt_fgenesh1_pm.C_3390006 I 0.825
AMTR_s00148p00046020 Amborella trichopoda AMTR_s00148p00046020 I 0.814
LPERR04G15300 Leersia perrieri LPERR04G15300 I 0.814
Traes_2BL_A1A475B0F Triticum aestivum Traes_2BL_A1A475B0F I 0.804
PK13393.1 Cannabis sativa PK13393.1 I 0.804
Pavir.Gb00635 Panicum virgatum Pavir.Gb00635 I 0.802
Pavir.J24081 Panicum virgatum Pavir.J24081 I 0.802
SELMODRAFT_437622 Selaginella moellendorffii SELMODRAFT_437622 I 0.794
SELMODRAFT_451564 Selaginella moellendorffii SELMODRAFT_451564 I 0.794
ONIVA06G31350 Oryza nivara ONIVA06G31350 I 0.784
OBART04G18910 Oryza barthii OBART04G18910 I 0.784
ARF10 Oryza indica BGIOSGA016767 I 0.784
ORGLA04G0160200 Oryza glaberrima ORGLA04G0160200 I 0.784
OGLUM01G18360 Oryza glumaepatula OGLUM01G18360 I 0.784
OMERI04G15770 Oryza meridionalis OMERI04G15770 I 0.784
OPUNC04G16630 Oryza punctata OPUNC04G16630 I 0.784
Si009541m.g Setaria italica Si009541m.g I 0.784
OS04G0519700 Oryza sativa OS04G0519700 I 0.784
Ca_08488 Cicer arietinum Ca_08488 I 0.773
Solyc10g086130.1 Solanum lycopersicum Solyc10g086130.1 I 0.753
OB04G25990 Oryza brachyantha OB04G25990 I 0.753
PGSC0003DMG400024320 Solanum tuberosum PGSC0003DMG400024320 I 0.753
Solyc06g075150.2 Solanum lycopersicum Solyc06g075150.2 I 0.742
BRADI5G15904 Brachypodium distachyon BRADI5G15904 I 0.742
chr1.LjT31L11.90.nd Lotus japonicus chr1.LjT31L11.90.nd I 0.722
OBART02G24860 Oryza barthii OBART02G24860 I 0.720
GSMUA_Achr9G29480_001 Musa acuminata GSMUA_Achr9G29480_001 I 0.711
Cla022413 Citrullus lanatus Cla022413 I 0.711
MTR_0041s0110 Medicago truncatula MTR_0041s0110 I 0.711
Pavir.J37640 Panicum virgatum Pavir.J37640 I 0.711
ORUFI04G20430 Oryza rufipogon ORUFI04G20430 I 0.711
MTR_7g101280 Medicago truncatula MTR_7g101280 I 0.711
PDK_20s1359671g001 Phoenix dactylifera PDK_20s1359671g001 I 0.701
29908.m005953 Ricinus communis 29908.m005953 I 0.701
TCM_035002 Theobroma cacao TCM_035002 I 0.701
PK10136.1 Cannabis sativa PK10136.1 I 0.701
evm.TU.supercontig_49.122 Carica papaya evm.TU.supercontig_49.122 I 0.701
PRUPE_ppa003136mg Prunus persica PRUPE_ppa003136mg I 0.701
Ca_17624 Cicer arietinum Ca_17624 I 0.701