chr2.CM0201.60.nd (Lotus japonicus)
B3

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF02362 (B3) IPR003340 chr2.CM0201.60.nd T024386_2.00 Superfamily (2010-Oct-26)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ARF3
M00852_2.00 		Arabidopsis thaliana
NKGTYBNN
NNVRACMN		 PBM
Franco-Zorrilla et al.(2014)
ETTIN 		0.703 0.703
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
chr2.CM0201.60.nd B3 31 70

Links

Other B3 family TFs
Other Lotus japonicus TFs

115 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
OS05G0515400 Oryza sativa OS05G0515400 I 0.730
OPUNC05G20300 Oryza punctata OPUNC05G20300 I 0.730
OMERI05G20390 Oryza meridionalis OMERI05G20390 I 0.730
ONIVA05G23630 Oryza nivara ONIVA05G23630 I 0.730
OGLUM05G23980 Oryza glumaepatula OGLUM05G23980 I 0.730
ORUFI05G24090 Oryza rufipogon ORUFI05G24090 I 0.730
OBART05G22670 Oryza barthii OBART05G22670 I 0.730
ORGLA05G0198900 Oryza glaberrima ORGLA05G0198900 I 0.730
cassava6009.valid.m1 Manihot esculenta cassava6009.valid.m1 I 0.703
estExt_Genewise1.C_140304 Physcomitrella patens estExt_Genewise1.C_140304 I 0.703
Aquca_027_00067 Aquilegia coerulea Aquca_027_00067 I 0.703
Aquca_051_00062 Aquilegia coerulea Aquca_051_00062 I 0.703
mgf016063m Mimulus guttatus mgf016063m I 0.703
mgf011102m Mimulus guttatus mgf011102m I 0.703
cassava1599.valid.m1 Manihot esculenta cassava1599.valid.m1 I 0.703
Cucsa.046570 Cucumis sativus Cucsa.046570 I 0.703
29900.m001540 Ricinus communis 29900.m001540 I 0.703
TRIUR3_33948 Triticum urartu TRIUR3_33948 I 0.703
TRIUR3_35254 Triticum urartu TRIUR3_35254 I 0.703
TRIUR3_14814 Triticum urartu TRIUR3_14814 I 0.703
TRAES3BF097400050CFD_g Triticum aestivum TRAES3BF097400050CFD_g I 0.703
Traes_3AL_A30A3C355 Triticum aestivum Traes_3AL_A30A3C355 I 0.703
ARF4 Vitis vinifera VIT_06s0004g03130 I 0.703
Ca_00347 Cicer arietinum Ca_00347 I 0.703
Pm000994 Prunus mume Pm000994 I 0.703
Pm031349 Prunus mume Pm031349 I 0.703
Cla009812 Citrullus lanatus Cla009812 I 0.703
Cla000568 Citrullus lanatus Cla000568 I 0.703
Ca_06352 Cicer arietinum Ca_06352 I 0.703
Bostr.26833s0196 Boechera stricta Bostr.26833s0196 I 0.703
Cagra.2519s0017 Capsella grandiflora Cagra.2519s0017 I 0.703
SapurV1A.0012s0780 Salix purpurea SapurV1A.0012s0780 I 0.703
SapurV1A.0032s0660 Salix purpurea SapurV1A.0032s0660 I 0.703
Pavir.J38128 Panicum virgatum Pavir.J38128 I 0.703
Pavir.J17853 Panicum virgatum Pavir.J17853 I 0.703
Pavir.Eb02716 Panicum virgatum Pavir.Eb02716 I 0.703
Pavir.Eb03157 Panicum virgatum Pavir.Eb03157 I 0.703
Thhalv10012074m.g Eutrema salsugineum Thhalv10012074m.g I 0.703
Thhalv10012728m.g Eutrema salsugineum Thhalv10012728m.g I 0.703
PDK_20s1465161g002 Phoenix dactylifera PDK_20s1465161g002 I 0.703
PDK_20s1663351g001 Phoenix dactylifera PDK_20s1663351g001 I 0.703
LjSGA_103336.1 Lotus japonicus LjSGA_103336.1 I 0.703
LjSGA_059669.1 Lotus japonicus LjSGA_059669.1 I 0.703
PK07904.1 Cannabis sativa PK07904.1 I 0.703
PK18282.1 Cannabis sativa PK18282.1 I 0.703
Pavir.Ca00928 Panicum virgatum Pavir.Ca00928 I 0.703
orange1.1g004106m.g Citrus sinensis orange1.1g004106m.g I 0.703
evm.TU.supercontig_139.80 Carica papaya evm.TU.supercontig_139.80 I 0.703
evm.TU.supercontig_7.3 Carica papaya evm.TU.supercontig_7.3 I 0.703
Eucgr.D00588 Eucalyptus grandis Eucgr.D00588 I 0.703
Ciclev10027839m.g Citrus clementina Ciclev10027839m.g I 0.703
Carubv10025912m.g Capsella rubella Carubv10025912m.g I 0.703
Ciclev10014391m.g Citrus clementina Ciclev10014391m.g I 0.703
gene28545-v1.0-hybrid Fragaria vesca gene28545-v1.0-hybrid I 0.703
Gorai.009G166100 Gossypium raimondii Gorai.009G166100 I 0.703
MDP0000412781 Malus domestica MDP0000412781 I 0.703
orange1.1g003580m.g Citrus sinensis orange1.1g003580m.g I 0.703
MDP0000225980 Malus domestica MDP0000225980 I 0.703
Gorai.011G030900 Gossypium raimondii Gorai.011G030900 I 0.703
Gorai.010G157400 Gossypium raimondii Gorai.010G157400 I 0.703
Traes_1DL_92BCA55C0 Triticum aestivum Traes_1DL_92BCA55C0 I 0.703
Si000545m.g Setaria italica Si000545m.g I 0.703
GRMZM2G056120 Zea mays GRMZM2G056120 I 0.703
GRMZM2G361376 Zea mays GRMZM2G361376 N 0.703
GRMZM2G030710 Zea mays GRMZM2G030710 I 0.703
GLYMA15G08540 Glycine max GLYMA15G08540 I 0.703
GLYMA13G40310 Glycine max GLYMA13G40310 I 0.703
GRMZM2G441325 Zea mays GRMZM2G441325 I 0.703
GRMZM5G874163 Zea mays GRMZM5G874163 I 0.703
MLOC_25537 Hordeum vulgare MLOC_25537 I 0.703
MLOC_38232 Hordeum vulgare MLOC_38232 I 0.703
LPERR01G26810 Leersia perrieri LPERR01G26810 I 0.703
GSMUA_Achr7G25330_001 Musa acuminata GSMUA_Achr7G25330_001 I 0.703
GSMUA_Achr10G26140_001 Musa acuminata GSMUA_Achr10G26140_001 I 0.703
GLYMA13G24240 Glycine max GLYMA13G24240 I 0.703
GLYMA12G29280 Glycine max GLYMA12G29280 I 0.703
Bra002479 Brassica rapa Bra002479 I 0.703
Bra021885 Brassica rapa Bra021885 I 0.703
Bo9g143570 Brassica oleracea Bo9g143570 I 0.703
Bo2g024860 Brassica oleracea Bo2g024860 I 0.703
BGIOSGA000812 Oryza indica BGIOSGA000812 I 0.703
BRADI2G19867 Brachypodium distachyon BRADI2G19867 I 0.703
BRADI2G50120 Brachypodium distachyon BRADI2G50120 I 0.703
GLYMA12G07560 Glycine max GLYMA12G07560 I 0.703
GLYMA07G32300 Glycine max GLYMA07G32300 I 0.703
ARF4 Arabidopsis lyrata fgenesh2_kg.8__2008__AT5G60450.1 I 0.703
F775_20129 Aegilops tauschii F775_20129 I 0.703
MTR_2g014770 Medicago truncatula MTR_2g014770 I 0.703
MTR_2g093740 Medicago truncatula MTR_2g093740 I 0.703
POPTR_0011s05830 Populus trichocarpa POPTR_0011s05830 I 0.703
PRUPE_ppa001557mg Prunus persica PRUPE_ppa001557mg I 0.703
POPTR_0009s01700 Populus trichocarpa POPTR_0009s01700 I 0.703
POPTR_0004s04970 Populus trichocarpa POPTR_0004s04970 I 0.703
PGSC0003DMG400008065 Solanum tuberosum PGSC0003DMG400008065 I 0.703
PRUPE_ppa002065m1g Prunus persica PRUPE_ppa002065m1g I 0.703
Sb03g034850 Sorghum bicolor Sb03g034850 I 0.703
Si021589m.g Setaria italica Si021589m.g I 0.703
TCM_029792 Theobroma cacao TCM_029792 I 0.703
Si004598m.g Setaria italica Si004598m.g I 0.703
ARF4 Arabidopsis thaliana AT5G60450 I 0.703
Sb09g025500 Sorghum bicolor Sb09g025500 I 0.703
ARF3 Oryza sativa OS01G0753500 I 0.703
ORUFI01G34340 Oryza rufipogon ORUFI01G34340 I 0.703
OB05G33320 Oryza brachyantha OB05G33320 I 0.703
OBART01G31160 Oryza barthii OBART01G31160 I 0.703
OB01G40150 Oryza brachyantha OB01G40150 I 0.703
OB01G35190 Oryza brachyantha OB01G35190 I 0.703
MTR_4g088210 Medicago truncatula MTR_4g088210 I 0.703
OGLUM01G35360 Oryza glumaepatula OGLUM01G35360 I 0.703
OLONG_019459 Oryza longistaminata OLONG_019459 I 0.703
OPUNC01G30260 Oryza punctata OPUNC01G30260 I 0.703
ONIVA01G35630 Oryza nivara ONIVA01G35630 I 0.703
OMERI02G35490 Oryza meridionalis OMERI02G35490 I 0.703
OMERI01G28330 Oryza meridionalis OMERI01G28330 I 0.703
Traes_1AL_B14FE48AF Triticum aestivum Traes_1AL_B14FE48AF I 0.703