CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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chr6.CM0420.10.nd
(
Lotus japonicus
)
B3
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF02362 (B3)
IPR003340
chr6.CM0420.10.nd
T024410_2.00
Superfamily (2010-Oct-26)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
chr6.CM0420.10.nd
B3
74
148
FCKTLTASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQEIVAKDLHDNTWTFRHIYRGILTLTFLSLPSSFTLF
Links
Other
B3
family TFs
Other
Lotus japonicus
TFs
95 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Cucsa.117420
Cucumis sativus
Cucsa.117420
I
0.827
LjSGA_022975.2
Lotus japonicus
LjSGA_022975.2
I
0.827
VIT_11s0016g00640
Vitis vinifera
VIT_11s0016g00640
I
0.809
Gorai.010G091300
Gossypium raimondii
Gorai.010G091300
I
0.809
MTR_2g043250
Medicago truncatula
MTR_2g043250
I
0.809
SapurV1A.4298s0010
Salix purpurea
SapurV1A.4298s0010
I
0.800
POPTR_0006s14070
Populus trichocarpa
POPTR_0006s14070
I
0.794
GRMZM2G317900
Zea mays
GRMZM2G317900
I
0.794
29739.m003713
Ricinus communis
29739.m003713
I
0.794
MTR_4g124900
Medicago truncatula
MTR_4g124900
I
0.794
ORUFI06G26570
Oryza rufipogon
ORUFI06G26570
I
0.780
PRUPE_ppa000479mg
Prunus persica
PRUPE_ppa000479mg
I
0.779
MDP0000185253
Malus domestica
MDP0000185253
I
0.779
Pm008963
Prunus mume
Pm008963
I
0.779
evm.TU.supercontig_115.30
Carica papaya
evm.TU.supercontig_115.30
I
0.779
Carubv10000065m.g
Capsella rubella
Carubv10000065m.g
I
0.779
GSMUA_Achr5G05010_001
Musa acuminata
GSMUA_Achr5G05010_001
I
0.779
ORUFI08G23260
Oryza rufipogon
ORUFI08G23260
I
0.765
ORGLA08G0183900
Oryza glaberrima
ORGLA08G0183900
I
0.765
BGIOSGA026655
Oryza indica
BGIOSGA026655
I
0.765
AMTR_s00007p00267580
Amborella trichopoda
AMTR_s00007p00267580
I
0.765
PRUPE_ppa000708mg
Prunus persica
PRUPE_ppa000708mg
I
0.765
OPUNC08G18850
Oryza punctata
OPUNC08G18850
I
0.765
OS08G0520550
Oryza sativa
OS08G0520550
I
0.765
OMERI02G01870
Oryza meridionalis
OMERI02G01870
I
0.765
Lus10033635.g
Linum usitatissimum
Lus10033635.g
I
0.765
mgf012918m
Mimulus guttatus
mgf012918m
I
0.765
ONIVA08G23730
Oryza nivara
ONIVA08G23730
I
0.765
Pm027119
Prunus mume
Pm027119
I
0.765
OBART08G20780
Oryza barthii
OBART08G20780
I
0.765
OGLUM08G22050
Oryza glumaepatula
OGLUM08G22050
I
0.765
LjSGA_026543.1
Lotus japonicus
LjSGA_026543.1
I
0.763
Sb04g003240
Sorghum bicolor
Sb04g003240
I
0.750
Si013155m.g
Setaria italica
Si013155m.g
I
0.750
MDP0000143749
Malus domestica
MDP0000143749
I
0.750
Sb07g027080
Sorghum bicolor
Sb07g027080
I
0.750
OMERI04G24630
Oryza meridionalis
OMERI04G24630
I
0.745
Traes_2AL_98457FFEE
Triticum aestivum
Traes_2AL_98457FFEE
I
0.738
Solyc12g006350.1
Solanum lycopersicum
Solyc12g006350.1
I
0.736
Solyc04g081240.2
Solanum lycopersicum
Solyc04g081240.2
I
0.735
Cla021128
Citrullus lanatus
Cla021128
I
0.735
GRMZM2G102845
Zea mays
GRMZM2G102845
I
0.735
OB06G15720
Oryza brachyantha
OB06G15720
I
0.735
PGSC0003DMG400003771
Solanum tuberosum
PGSC0003DMG400003771
I
0.735
VIT_04s0079g00160
Vitis vinifera
VIT_04s0079g00160
I
0.734
evm.TU.supercontig_108.15
Carica papaya
evm.TU.supercontig_108.15
I
0.730
Ca_10748
Cicer arietinum
Ca_10748
I
0.721
BRADI1G46602
Brachypodium distachyon
BRADI1G46602
I
0.721
PDK_20s1375001g001
Phoenix dactylifera
PDK_20s1375001g001
I
0.721
Cla019844
Citrullus lanatus
Cla019844
I
0.721
evm.TU.supercontig_26.25
Carica papaya
evm.TU.supercontig_26.25
I
0.721
Cucsa.152170
Cucumis sativus
Cucsa.152170
I
0.721
Traes_7DS_1948388F8
Triticum aestivum
Traes_7DS_1948388F8
I
0.721
MLOC_14584
Hordeum vulgare
MLOC_14584
I
0.721
MTR_1g024025
Medicago truncatula
MTR_1g024025
I
0.721
Traes_7BS_F44A273F8
Triticum aestivum
Traes_7BS_F44A273F8
I
0.721
SELMODRAFT_451392
Selaginella moellendorffii
SELMODRAFT_451392
I
0.721
SELMODRAFT_179736
Selaginella moellendorffii
SELMODRAFT_179736
I
0.721
Traes_7AS_582E3076D
Triticum aestivum
Traes_7AS_582E3076D
I
0.721
VIT_03s0167g00010
Vitis vinifera
VIT_03s0167g00010
I
0.719
F775_20129
Aegilops tauschii
F775_20129
I
0.710
Ca_05876
Cicer arietinum
Ca_05876
N
0.708
Lus10024320.g
Linum usitatissimum
Lus10024320.g
I
0.706
Gorai.009G152700
Gossypium raimondii
Gorai.009G152700
I
0.706
GSMUA_Achr11G01610_001
Musa acuminata
GSMUA_Achr11G01610_001
I
0.706
TCM_029410
Theobroma cacao
TCM_029410
I
0.706
GRMZM2G086949
Zea mays
GRMZM2G086949
I
0.706
gene30394-v1.0-hybrid
Fragaria vesca
gene30394-v1.0-hybrid
I
0.706
MDP0000268306
Malus domestica
MDP0000268306
I
0.706
BGIOSGA014158
Oryza indica
BGIOSGA014158
I
0.706
Sb08g021460
Sorghum bicolor
Sb08g021460
I
0.706
PK26077.1
Cannabis sativa
PK26077.1
I
0.706
SapurV1A.0030s0180
Salix purpurea
SapurV1A.0030s0180
I
0.706
GRMZM2G034840
Zea mays
GRMZM2G034840
I
0.706
GSMUA_Achr11G25770_001
Musa acuminata
GSMUA_Achr11G25770_001
I
0.706
GRMZM2G081158
Zea mays
GRMZM2G081158
I
0.706
MLOC_55345
Hordeum vulgare
MLOC_55345
I
0.706
Traes_2BL_E322FD546
Triticum aestivum
Traes_2BL_E322FD546
I
0.706
Pm010467
Prunus mume
Pm010467
I
0.706
Sb06g031900
Sorghum bicolor
Sb06g031900
I
0.706
Traes_2DL_FBE64209C
Triticum aestivum
Traes_2DL_FBE64209C
I
0.706
Cla009963
Citrullus lanatus
Cla009963
I
0.706
Traes_7DL_C89614A4D
Triticum aestivum
Traes_7DL_C89614A4D
I
0.706
ARF6
Vitis vinifera
VIT_10s0003g04100
I
0.706
Traes_7BL_66296695F
Triticum aestivum
Traes_7BL_66296695F
I
0.706
29599.m000177
Ricinus communis
29599.m000177
I
0.706
MLOC_58330
Hordeum vulgare
MLOC_58330
I
0.706
Cucsa.047990
Cucumis sativus
Cucsa.047990
I
0.706
PRUPE_ppa001179mg
Prunus persica
PRUPE_ppa001179mg
I
0.706
cassava32201.m1
Manihot esculenta
cassava32201.m1
I
0.706
cassava29104.valid.m1
Manihot esculenta
cassava29104.valid.m1
I
0.706
cassava29103.valid.m1
Manihot esculenta
cassava29103.valid.m1
I
0.706
Traes_2AL_05ECC440C
Triticum aestivum
Traes_2AL_05ECC440C
I
0.706
cassava2408.valid.m1
Manihot esculenta
cassava2408.valid.m1
I
0.706
PRUPE_ppa024354mg
Prunus persica
PRUPE_ppa024354mg
I
0.705