chr6.CM0420.10.nd (Lotus japonicus)
B3

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF02362 (B3) IPR003340 chr6.CM0420.10.nd T024410_2.00 Superfamily (2010-Oct-26)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
chr6.CM0420.10.nd B3 74 148

Links

Other B3 family TFs
Other Lotus japonicus TFs

95 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
Cucsa.117420 Cucumis sativus Cucsa.117420 I 0.827
LjSGA_022975.2 Lotus japonicus LjSGA_022975.2 I 0.827
VIT_11s0016g00640 Vitis vinifera VIT_11s0016g00640 I 0.809
Gorai.010G091300 Gossypium raimondii Gorai.010G091300 I 0.809
MTR_2g043250 Medicago truncatula MTR_2g043250 I 0.809
SapurV1A.4298s0010 Salix purpurea SapurV1A.4298s0010 I 0.800
POPTR_0006s14070 Populus trichocarpa POPTR_0006s14070 I 0.794
GRMZM2G317900 Zea mays GRMZM2G317900 I 0.794
29739.m003713 Ricinus communis 29739.m003713 I 0.794
MTR_4g124900 Medicago truncatula MTR_4g124900 I 0.794
ORUFI06G26570 Oryza rufipogon ORUFI06G26570 I 0.780
PRUPE_ppa000479mg Prunus persica PRUPE_ppa000479mg I 0.779
MDP0000185253 Malus domestica MDP0000185253 I 0.779
Pm008963 Prunus mume Pm008963 I 0.779
evm.TU.supercontig_115.30 Carica papaya evm.TU.supercontig_115.30 I 0.779
Carubv10000065m.g Capsella rubella Carubv10000065m.g I 0.779
GSMUA_Achr5G05010_001 Musa acuminata GSMUA_Achr5G05010_001 I 0.779
ORUFI08G23260 Oryza rufipogon ORUFI08G23260 I 0.765
ORGLA08G0183900 Oryza glaberrima ORGLA08G0183900 I 0.765
BGIOSGA026655 Oryza indica BGIOSGA026655 I 0.765
AMTR_s00007p00267580 Amborella trichopoda AMTR_s00007p00267580 I 0.765
PRUPE_ppa000708mg Prunus persica PRUPE_ppa000708mg I 0.765
OPUNC08G18850 Oryza punctata OPUNC08G18850 I 0.765
OS08G0520550 Oryza sativa OS08G0520550 I 0.765
OMERI02G01870 Oryza meridionalis OMERI02G01870 I 0.765
Lus10033635.g Linum usitatissimum Lus10033635.g I 0.765
mgf012918m Mimulus guttatus mgf012918m I 0.765
ONIVA08G23730 Oryza nivara ONIVA08G23730 I 0.765
Pm027119 Prunus mume Pm027119 I 0.765
OBART08G20780 Oryza barthii OBART08G20780 I 0.765
OGLUM08G22050 Oryza glumaepatula OGLUM08G22050 I 0.765
LjSGA_026543.1 Lotus japonicus LjSGA_026543.1 I 0.763
Sb04g003240 Sorghum bicolor Sb04g003240 I 0.750
Si013155m.g Setaria italica Si013155m.g I 0.750
MDP0000143749 Malus domestica MDP0000143749 I 0.750
Sb07g027080 Sorghum bicolor Sb07g027080 I 0.750
OMERI04G24630 Oryza meridionalis OMERI04G24630 I 0.745
Traes_2AL_98457FFEE Triticum aestivum Traes_2AL_98457FFEE I 0.738
Solyc12g006350.1 Solanum lycopersicum Solyc12g006350.1 I 0.736
Solyc04g081240.2 Solanum lycopersicum Solyc04g081240.2 I 0.735
Cla021128 Citrullus lanatus Cla021128 I 0.735
GRMZM2G102845 Zea mays GRMZM2G102845 I 0.735
OB06G15720 Oryza brachyantha OB06G15720 I 0.735
PGSC0003DMG400003771 Solanum tuberosum PGSC0003DMG400003771 I 0.735
VIT_04s0079g00160 Vitis vinifera VIT_04s0079g00160 I 0.734
evm.TU.supercontig_108.15 Carica papaya evm.TU.supercontig_108.15 I 0.730
Ca_10748 Cicer arietinum Ca_10748 I 0.721
BRADI1G46602 Brachypodium distachyon BRADI1G46602 I 0.721
PDK_20s1375001g001 Phoenix dactylifera PDK_20s1375001g001 I 0.721
Cla019844 Citrullus lanatus Cla019844 I 0.721
evm.TU.supercontig_26.25 Carica papaya evm.TU.supercontig_26.25 I 0.721
Cucsa.152170 Cucumis sativus Cucsa.152170 I 0.721
Traes_7DS_1948388F8 Triticum aestivum Traes_7DS_1948388F8 I 0.721
MLOC_14584 Hordeum vulgare MLOC_14584 I 0.721
MTR_1g024025 Medicago truncatula MTR_1g024025 I 0.721
Traes_7BS_F44A273F8 Triticum aestivum Traes_7BS_F44A273F8 I 0.721
SELMODRAFT_451392 Selaginella moellendorffii SELMODRAFT_451392 I 0.721
SELMODRAFT_179736 Selaginella moellendorffii SELMODRAFT_179736 I 0.721
Traes_7AS_582E3076D Triticum aestivum Traes_7AS_582E3076D I 0.721
VIT_03s0167g00010 Vitis vinifera VIT_03s0167g00010 I 0.719
F775_20129 Aegilops tauschii F775_20129 I 0.710
Ca_05876 Cicer arietinum Ca_05876 N 0.708
Lus10024320.g Linum usitatissimum Lus10024320.g I 0.706
Gorai.009G152700 Gossypium raimondii Gorai.009G152700 I 0.706
GSMUA_Achr11G01610_001 Musa acuminata GSMUA_Achr11G01610_001 I 0.706
TCM_029410 Theobroma cacao TCM_029410 I 0.706
GRMZM2G086949 Zea mays GRMZM2G086949 I 0.706
gene30394-v1.0-hybrid Fragaria vesca gene30394-v1.0-hybrid I 0.706
MDP0000268306 Malus domestica MDP0000268306 I 0.706
BGIOSGA014158 Oryza indica BGIOSGA014158 I 0.706
Sb08g021460 Sorghum bicolor Sb08g021460 I 0.706
PK26077.1 Cannabis sativa PK26077.1 I 0.706
SapurV1A.0030s0180 Salix purpurea SapurV1A.0030s0180 I 0.706
GRMZM2G034840 Zea mays GRMZM2G034840 I 0.706
GSMUA_Achr11G25770_001 Musa acuminata GSMUA_Achr11G25770_001 I 0.706
GRMZM2G081158 Zea mays GRMZM2G081158 I 0.706
MLOC_55345 Hordeum vulgare MLOC_55345 I 0.706
Traes_2BL_E322FD546 Triticum aestivum Traes_2BL_E322FD546 I 0.706
Pm010467 Prunus mume Pm010467 I 0.706
Sb06g031900 Sorghum bicolor Sb06g031900 I 0.706
Traes_2DL_FBE64209C Triticum aestivum Traes_2DL_FBE64209C I 0.706
Cla009963 Citrullus lanatus Cla009963 I 0.706
Traes_7DL_C89614A4D Triticum aestivum Traes_7DL_C89614A4D I 0.706
ARF6 Vitis vinifera VIT_10s0003g04100 I 0.706
Traes_7BL_66296695F Triticum aestivum Traes_7BL_66296695F I 0.706
29599.m000177 Ricinus communis 29599.m000177 I 0.706
MLOC_58330 Hordeum vulgare MLOC_58330 I 0.706
Cucsa.047990 Cucumis sativus Cucsa.047990 I 0.706
PRUPE_ppa001179mg Prunus persica PRUPE_ppa001179mg I 0.706
cassava32201.m1 Manihot esculenta cassava32201.m1 I 0.706
cassava29104.valid.m1 Manihot esculenta cassava29104.valid.m1 I 0.706
cassava29103.valid.m1 Manihot esculenta cassava29103.valid.m1 I 0.706
Traes_2AL_05ECC440C Triticum aestivum Traes_2AL_05ECC440C I 0.706
cassava2408.valid.m1 Manihot esculenta cassava2408.valid.m1 I 0.706
PRUPE_ppa024354mg Prunus persica PRUPE_ppa024354mg I 0.705