LjSGA_011266.1 (Lotus japonicus)
B3

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF02362 (B3) IPR003340 LjSGA_011266.1 T024417_2.00 Superfamily (2010-Oct-26)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
LjSGA_011266.1 B3 77 179

Links

Other B3 family TFs
Other Lotus japonicus TFs

180 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Ca_00826 Cicer arietinum Ca_00826 N 0.891
GLYMA19G38340 Glycine max GLYMA19G38340 N 0.881
GLYMA03G35700 Glycine max GLYMA03G35700 N 0.881
MTR_7g105370 Medicago truncatula MTR_7g105370 N 0.871
GLYMA02G36090 Glycine max GLYMA02G36090 I 0.851
MTR_1g058350 Medicago truncatula MTR_1g058350 N 0.851
GLYMA10G08871 Glycine max GLYMA10G08871 I 0.832
orange1.1g019261m.g Citrus sinensis orange1.1g019261m.g I 0.828
Ciclev10012008m.g Citrus clementina Ciclev10012008m.g I 0.828
Ca_25633 Cicer arietinum Ca_25633 I 0.822
PRUPE_ppa019539mg Prunus persica PRUPE_ppa019539mg I 0.818
PGSC0003DMG400008936 Solanum tuberosum PGSC0003DMG400008936 N 0.812
Bostr.23794s0488 Boechera stricta Bostr.23794s0488 N 0.812
Carubv10023925m.g Capsella rubella Carubv10023925m.g N 0.812
Cagra.0993s0119 Capsella grandiflora Cagra.0993s0119 N 0.812
Bra017262 Brassica rapa Bra017262 N 0.812
Thhalv10017156m.g Eutrema salsugineum Thhalv10017156m.g N 0.812
scaffold_402221.1 Arabidopsis lyrata scaffold_402221.1 N 0.812
Solyc09g010230.1 Solanum lycopersicum Solyc09g010230.1 N 0.812
Bo01079s020 Brassica oleracea Bo01079s020 N 0.802
AT3G11580 Arabidopsis thaliana AT3G11580 N 0.802
Thhalv10021305m.g Eutrema salsugineum Thhalv10021305m.g N 0.802
ARF31 Arabidopsis thaliana AT2G36080 N 0.802
gene15627-v1.0-hybrid Fragaria vesca gene15627-v1.0-hybrid I 0.802
scaffold_301330.1 Arabidopsis lyrata scaffold_301330.1 N 0.802
Bostr.19424s1090 Boechera stricta Bostr.19424s1090 N 0.802
PK04952.1 Cannabis sativa PK04952.1 I 0.802
30032.m000462 Ricinus communis 30032.m000462 N 0.802
TCM_022729 Theobroma cacao TCM_022729 N 0.798
Traes_1BL_53C31B54B Triticum aestivum Traes_1BL_53C31B54B I 0.793
Gorai.006G152400 Gossypium raimondii Gorai.006G152400 N 0.792
Gorai.002G237900 Gossypium raimondii Gorai.002G237900 I 0.792
VIT_08s0007g02810 Vitis vinifera VIT_08s0007g02810 N 0.792
cassava19218.valid.m1 Manihot esculenta cassava19218.valid.m1 N 0.792
Eucgr.A02625 Eucalyptus grandis Eucgr.A02625 N 0.792
POPTR_0016s07540 Populus trichocarpa POPTR_0016s07540 N 0.792
Cagra.1655s0012 Capsella grandiflora Cagra.1655s0012 N 0.792
Carubv10014376m.g Capsella rubella Carubv10014376m.g N 0.792
Bra001411 Brassica rapa Bra001411 N 0.792
SapurV1A.0974s0140 Salix purpurea SapurV1A.0974s0140 N 0.792
SapurV1A.1586s0010 Salix purpurea SapurV1A.1586s0010 N 0.792
Bra005886 Brassica rapa Bra005886 N 0.792
Bo3g064320 Brassica oleracea Bo3g064320 N 0.792
Bo4g035110 Brassica oleracea Bo4g035110 N 0.792
Bra005301 Brassica rapa Bra005301 N 0.792
fgenesh2_kg.6__566__AT5G06250.2 Arabidopsis lyrata fgenesh2_kg.6__566__AT5G06250.2 N 0.792
AT5G06250 Arabidopsis thaliana AT5G06250 N 0.792
MDP0000229742 Malus domestica MDP0000229742 N 0.792
Traes_2DL_896E50180 Triticum aestivum Traes_2DL_896E50180 I 0.786
Bo3g003800 Brassica oleracea Bo3g003800 N 0.782
POPTR_0006s22460 Populus trichocarpa POPTR_0006s22460 N 0.782
Cagra.2117s0038 Capsella grandiflora Cagra.2117s0038 I 0.782
Gorai.009G399000 Gossypium raimondii Gorai.009G399000 N 0.782
Bra034828 Brassica rapa Bra034828 N 0.782
Bostr.13129s0349 Boechera stricta Bostr.13129s0349 N 0.782
Bo5g136360 Brassica oleracea Bo5g136360 N 0.782
Carubv10001689m.g Capsella rubella Carubv10001689m.g I 0.782
evm.TU.contig_29173.1 Carica papaya evm.TU.contig_29173.1 I 0.782
SapurV1A.1211s0020 Salix purpurea SapurV1A.1211s0020 N 0.782
Bra041023 Brassica rapa Bra041023 N 0.782
Bo9g176470 Brassica oleracea Bo9g176470 N 0.782
cassava3990.m1 Manihot esculenta cassava3990.m1 N 0.772
PGSC0003DMG400028159 Solanum tuberosum PGSC0003DMG400028159 N 0.772
Cla017937 Citrullus lanatus Cla017937 I 0.772
mgf019085m Mimulus guttatus mgf019085m N 0.772
OMERI12G01740 Oryza meridionalis OMERI12G01740 N 0.772
Thhalv10015675m.g Eutrema salsugineum Thhalv10015675m.g I 0.772
OB12G13420 Oryza brachyantha OB12G13420 N 0.772
GSMUA_Achr6G35600_001 Musa acuminata GSMUA_Achr6G35600_001 N 0.772
Solyc10g083210.1 Solanum lycopersicum Solyc10g083210.1 N 0.772
TRIUR3_24950 Triticum urartu TRIUR3_24950 I 0.771
Traes_2AL_41E2E66D9 Triticum aestivum Traes_2AL_41E2E66D9 I 0.764
Cucsa.241440 Cucumis sativus Cucsa.241440 I 0.762
MLOC_56530 Hordeum vulgare MLOC_56530 N 0.758
BRADI4G42167 Brachypodium distachyon BRADI4G42167 N 0.758
BGIOSGA034469 Oryza indica BGIOSGA034469 N 0.752
Pavir.Ca00165 Panicum virgatum Pavir.Ca00165 N 0.752
Pavir.Cb02052 Panicum virgatum Pavir.Cb02052 N 0.752
OS11G0156000 Oryza sativa OS11G0156000 N 0.752
ORGLA11G0033600 Oryza glaberrima ORGLA11G0033600 N 0.752
OLONG_005139 Oryza longistaminata OLONG_005139 N 0.752
ONIVA07G22860 Oryza nivara ONIVA07G22860 N 0.752
Aquca_072_00063 Aquilegia coerulea Aquca_072_00063 I 0.752
OGLUM11G03240 Oryza glumaepatula OGLUM11G03240 N 0.752
OPUNC12G03300 Oryza punctata OPUNC12G03300 N 0.752
OMERI11G03310 Oryza meridionalis OMERI11G03310 N 0.752
OBART11G03590 Oryza barthii OBART11G03590 N 0.752
ORUFI11G03500 Oryza rufipogon ORUFI11G03500 N 0.752
OPUNC11G03320 Oryza punctata OPUNC11G03320 N 0.743
Lus10021326.g Linum usitatissimum Lus10021326.g N 0.743
SapurV1A.0666s0090 Salix purpurea SapurV1A.0666s0090 I 0.743
OB11G12920 Oryza brachyantha OB11G12920 N 0.743
Traes_2BL_5ECD53274 Triticum aestivum Traes_2BL_5ECD53274 N 0.737
Traes_5BL_B98E347A8 Triticum aestivum Traes_5BL_B98E347A8 N 0.733
Traes_5DL_CACDF70D6 Triticum aestivum Traes_5DL_CACDF70D6 N 0.733
BGIOSGA036599 Oryza indica BGIOSGA036599 N 0.733
GRMZM5G805685 Zea mays GRMZM5G805685 N 0.733
OBART12G03490 Oryza barthii OBART12G03490 N 0.733
MLOC_11014 Hordeum vulgare MLOC_11014 N 0.733
OGLUM12G04180 Oryza glumaepatula OGLUM12G04180 N 0.733
ORGLA12G0033700 Oryza glaberrima ORGLA12G0033700 N 0.733
ORUFI12G03970 Oryza rufipogon ORUFI12G03970 N 0.733
ONIVA12G03130 Oryza nivara ONIVA12G03130 N 0.733
BRADI4G25170 Brachypodium distachyon BRADI4G25170 N 0.733
Sb05g003450 Sorghum bicolor Sb05g003450 N 0.733
Traes_2DL_2128A95BD Triticum aestivum Traes_2DL_2128A95BD N 0.727
Cla014858 Citrullus lanatus Cla014858 N 0.727
mgf018965m Mimulus guttatus mgf018965m N 0.727
Cucsa.106780 Cucumis sativus Cucsa.106780 N 0.727
Sb01g030520 Sorghum bicolor Sb01g030520 N 0.724
MLOC_44012 Hordeum vulgare MLOC_44012 I 0.724
LPERR12G03290 Leersia perrieri LPERR12G03290 N 0.723
Si027632m.g Setaria italica Si027632m.g N 0.723
Pavir.Ha01761 Panicum virgatum Pavir.Ha01761 N 0.723
F775_02500 Aegilops tauschii F775_02500 N 0.723
Pavir.Hb01814 Panicum virgatum Pavir.Hb01814 N 0.723
Ciclev10020034m.g Citrus clementina Ciclev10020034m.g I 0.723
LPERR03G01560 Leersia perrieri LPERR03G01560 N 0.723
Gorai.003G073600 Gossypium raimondii Gorai.003G073600 I 0.723
GSMUA_Achr6G13140_001 Musa acuminata GSMUA_Achr6G13140_001 N 0.723
Traes_4BS_5FECB39FA Triticum aestivum Traes_4BS_5FECB39FA N 0.723
Traes_4AL_4F2E6EF28 Triticum aestivum Traes_4AL_4F2E6EF28 N 0.723
orange1.1g013565m.g Citrus sinensis orange1.1g013565m.g I 0.723
Traes_4DS_E6210A614 Triticum aestivum Traes_4DS_E6210A614 N 0.723
GSMUA_Achr3G19210_001 Musa acuminata GSMUA_Achr3G19210_001 N 0.723
OLONG_000415 Oryza longistaminata OLONG_000415 I 0.722
GRMZM2G328742 Zea mays GRMZM2G328742 N 0.720
GRMZM2G142999 Zea mays GRMZM2G142999 N 0.717
Pavir.J27608 Panicum virgatum Pavir.J27608 N 0.716
Pavir.Ib00059 Panicum virgatum Pavir.Ib00059 N 0.713
OGLUM04G22780 Oryza glumaepatula OGLUM04G22780 I 0.713
OBART04G22880 Oryza barthii OBART04G22880 I 0.713
GSMUA_Achr9G02600_001 Musa acuminata GSMUA_Achr9G02600_001 I 0.713
Pavir.Ga00960 Panicum virgatum Pavir.Ga00960 N 0.713
GRMZM2G102059 Zea mays GRMZM2G102059 N 0.713
Traes_2BL_439C794F5 Triticum aestivum Traes_2BL_439C794F5 N 0.713
LPERR04G18630 Leersia perrieri LPERR04G18630 N 0.713
Pavir.Ia04549 Panicum virgatum Pavir.Ia04549 N 0.713
ONIVA04G22030 Oryza nivara ONIVA04G22030 I 0.713
Si011823m.g Setaria italica Si011823m.g N 0.713
BGIOSGA014498 Oryza indica BGIOSGA014498 I 0.713
Sb08g003550 Sorghum bicolor Sb08g003550 N 0.713
Si036864m.g Setaria italica Si036864m.g N 0.713
Traes_4DL_A83084AC1 Triticum aestivum Traes_4DL_A83084AC1 N 0.713
chr1.CM0105.800.nc Lotus japonicus chr1.CM0105.800.nc I 0.713
Traes_4BL_D9784B20C1 Triticum aestivum Traes_4BL_D9784B20C1 N 0.713
Pavir.J38226 Panicum virgatum Pavir.J38226 N 0.713
Sb06g026370 Sorghum bicolor Sb06g026370 N 0.713
GRMZM2G018485 Zea mays GRMZM2G018485 N 0.713
Sb01g049150 Sorghum bicolor Sb01g049150 N 0.713
ORGLA04G0198400 Oryza glaberrima ORGLA04G0198400 I 0.713
BRADI5G19260 Brachypodium distachyon BRADI5G19260 I 0.713
OS04G0581400 Oryza sativa OS04G0581400 I 0.713
AMTR_s00114p00142630 Amborella trichopoda AMTR_s00114p00142630 I 0.704
SapurV1A.0003s0340 Salix purpurea SapurV1A.0003s0340 I 0.703
BGIOSGA011738 Oryza indica BGIOSGA011738 N 0.703
GLYMA16G01951 Glycine max GLYMA16G01951 I 0.703
PK11025.1 Cannabis sativa PK11025.1 I 0.703
GLYMA07G05381 Glycine max GLYMA07G05381 I 0.703
MTR_8g023990 Medicago truncatula MTR_8g023990 I 0.703
30076.m004471 Ricinus communis 30076.m004471 I 0.703
AMTR_s00018p00040300 Amborella trichopoda AMTR_s00018p00040300 N 0.703
OS03G0120900 Oryza sativa OS03G0120900 N 0.703
ORGLA03G0014300 Oryza glaberrima ORGLA03G0014300 N 0.703
Si010849m.g Setaria italica Si010849m.g N 0.703
VIT_02s0025g03000 Vitis vinifera VIT_02s0025g03000 I 0.703
TCM_015590 Theobroma cacao TCM_015590 I 0.703
Solyc08g013700.1 Solanum lycopersicum Solyc08g013700.1 I 0.703
Solyc08g013690.1 Solanum lycopersicum Solyc08g013690.1 I 0.703
OPUNC03G01540 Oryza punctata OPUNC03G01540 N 0.703
ONIVA02G30750 Oryza nivara ONIVA02G30750 N 0.703
OB03G11610 Oryza brachyantha OB03G11610 N 0.703
MTR_7g117455 Medicago truncatula MTR_7g117455 I 0.703
Gorai.008G261100 Gossypium raimondii Gorai.008G261100 I 0.703
Lus10004226.g Linum usitatissimum Lus10004226.g N 0.703
OBART03G01650 Oryza barthii OBART03G01650 N 0.703
OGLUM03G01630 Oryza glumaepatula OGLUM03G01630 N 0.703
OMERI03G01600 Oryza meridionalis OMERI03G01600 N 0.703
OLONG_010584 Oryza longistaminata OLONG_010584 I 0.702
Gorai.004G128200 Gossypium raimondii Gorai.004G128200 N 0.700