LjSGA_030678.1 (Lotus japonicus)
B3

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF02362 (B3) IPR003340 LjSGA_030678.1 T024425_2.00 Superfamily (2010-Oct-26)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ARF3
M00852_2.00 		Arabidopsis thaliana
NKGTYBNN
NNVRACMN		 PBM
Franco-Zorrilla et al.(2014)
ETTIN 		0.713 0.713
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
LjSGA_030678.1 B3 147 227

Links

Other B3 family TFs
Other Lotus japonicus TFs

130 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
GLYMA12G07560 Glycine max GLYMA12G07560 I 0.887
GLYMA12G29280 Glycine max GLYMA12G29280 I 0.875
SapurV1A.0240s0100 Salix purpurea SapurV1A.0240s0100 I 0.875
cassava6009.valid.m1 Manihot esculenta cassava6009.valid.m1 I 0.875
MTR_2g093740 Medicago truncatula MTR_2g093740 I 0.875
TCM_029792 Theobroma cacao TCM_029792 I 0.868
ARF4 Vitis vinifera VIT_06s0004g03130 I 0.863
gene28545-v1.0-hybrid Fragaria vesca gene28545-v1.0-hybrid I 0.863
Pm000994 Prunus mume Pm000994 I 0.863
PRUPE_ppa001557mg Prunus persica PRUPE_ppa001557mg I 0.863
Ca_02516 Cicer arietinum Ca_02516 N 0.850
MDP0000412781 Malus domestica MDP0000412781 I 0.850
MDP0000225980 Malus domestica MDP0000225980 I 0.850
Cagra.2519s0017 Capsella grandiflora Cagra.2519s0017 I 0.850
Bostr.26833s0196 Boechera stricta Bostr.26833s0196 I 0.850
Carubv10025912m.g Capsella rubella Carubv10025912m.g I 0.850
ARF4 Arabidopsis thaliana AT5G60450 I 0.850
evm.TU.supercontig_139.80 Carica papaya evm.TU.supercontig_139.80 I 0.850
POPTR_0009s01700 Populus trichocarpa POPTR_0009s01700 I 0.850
Eucgr.B02480 Eucalyptus grandis Eucgr.B02480 I 0.850
orange1.1g003580m.g Citrus sinensis orange1.1g003580m.g I 0.838
PGSC0003DMG400008065 Solanum tuberosum PGSC0003DMG400008065 I 0.838
Bo9g143570 Brassica oleracea Bo9g143570 I 0.838
Bra002479 Brassica rapa Bra002479 I 0.838
Ciclev10027839m.g Citrus clementina Ciclev10027839m.g I 0.838
Solyc11g069190.1 Solanum lycopersicum Solyc11g069190.1 I 0.838
Thhalv10012728m.g Eutrema salsugineum Thhalv10012728m.g I 0.838
ARF4 Arabidopsis lyrata fgenesh2_kg.8__2008__AT5G60450.1 I 0.838
PK07904.1 Cannabis sativa PK07904.1 I 0.838
Aquca_027_00067 Aquilegia coerulea Aquca_027_00067 I 0.825
mgf011102m Mimulus guttatus mgf011102m I 0.825
Aquca_051_00062 Aquilegia coerulea Aquca_051_00062 I 0.812
mgf016063m Mimulus guttatus mgf016063m I 0.812
Gorai.011G030900 Gossypium raimondii Gorai.011G030900 I 0.800
Bo2g024860 Brassica oleracea Bo2g024860 I 0.800
Gorai.009G166100 Gossypium raimondii Gorai.009G166100 I 0.800
Gorai.009G078800 Gossypium raimondii Gorai.009G078800 I 0.800
AMTR_s00034p00110140 Amborella trichopoda AMTR_s00034p00110140 I 0.800
LjSGA_059669.1 Lotus japonicus LjSGA_059669.1 I 0.800
MTR_4g088210 Medicago truncatula MTR_4g088210 I 0.800
orange1.1g004106m.g Citrus sinensis orange1.1g004106m.g I 0.787
POPTR_0011s05830 Populus trichocarpa POPTR_0011s05830 I 0.787
TRIUR3_33948 Triticum urartu TRIUR3_33948 I 0.787
29900.m001540 Ricinus communis 29900.m001540 I 0.787
evm.TU.supercontig_7.3 Carica papaya evm.TU.supercontig_7.3 I 0.787
Ciclev10014391m.g Citrus clementina Ciclev10014391m.g I 0.787
POPTR_0004s04970 Populus trichocarpa POPTR_0004s04970 I 0.787
GLYMA13G24240 Glycine max GLYMA13G24240 I 0.787
SapurV1A.0032s0660 Salix purpurea SapurV1A.0032s0660 I 0.787
GLYMA07G32300 Glycine max GLYMA07G32300 I 0.787
LjSGA_103336.1 Lotus japonicus LjSGA_103336.1 I 0.787
PDK_20s1465161g002 Phoenix dactylifera PDK_20s1465161g002 I 0.787
SapurV1A.0012s0780 Salix purpurea SapurV1A.0012s0780 I 0.787
MTR_2g014770 Medicago truncatula MTR_2g014770 I 0.787
MLOC_38232 Hordeum vulgare MLOC_38232 I 0.785
Pm031349 Prunus mume Pm031349 I 0.775
MDP0000173151 Malus domestica MDP0000173151 I 0.775
orange1.1g012439m.g Citrus sinensis orange1.1g012439m.g I 0.775
MDP0000179650 Malus domestica MDP0000179650 I 0.775
GLYMA13G40310 Glycine max GLYMA13G40310 I 0.775
Ca_14590 Cicer arietinum Ca_14590 I 0.775
Ca_06352 Cicer arietinum Ca_06352 I 0.775
Lus10013942.g Linum usitatissimum Lus10013942.g I 0.775
PDK_20s1663351g001 Phoenix dactylifera PDK_20s1663351g001 I 0.775
PK18282.1 Cannabis sativa PK18282.1 I 0.775
gene29771-v1.0-hybrid Fragaria vesca gene29771-v1.0-hybrid I 0.775
PRUPE_ppa002065m1g Prunus persica PRUPE_ppa002065m1g I 0.775
GRMZM2G030710 Zea mays GRMZM2G030710 I 0.775
GLYMA15G08540 Glycine max GLYMA15G08540 I 0.775
Ciclev10000976m.g Citrus clementina Ciclev10000976m.g I 0.775
Eucgr.D00588 Eucalyptus grandis Eucgr.D00588 I 0.775
Aquca_036_00025 Aquilegia coerulea Aquca_036_00025 I 0.775
MTR_4g060460 Medicago truncatula MTR_4g060460 I 0.762
PGSC0003DMG400031769 Solanum tuberosum PGSC0003DMG400031769 I 0.762
Gorai.010G157400 Gossypium raimondii Gorai.010G157400 I 0.762
Solyc02g077560.2 Solanum lycopersicum Solyc02g077560.2 I 0.762
BRADI2G16610 Brachypodium distachyon BRADI2G16610 I 0.762
F775_32247 Aegilops tauschii F775_32247 I 0.762
Cla009812 Citrullus lanatus Cla009812 I 0.762
Cucsa.046570 Cucumis sativus Cucsa.046570 I 0.762
Pavir.Ca00928 Panicum virgatum Pavir.Ca00928 I 0.750
LPERR01G26810 Leersia perrieri LPERR01G26810 I 0.750
TRIUR3_14814 Triticum urartu TRIUR3_14814 I 0.750
Traes_1DL_92BCA55C0 Triticum aestivum Traes_1DL_92BCA55C0 I 0.750
Traes_1AL_B14FE48AF Triticum aestivum Traes_1AL_B14FE48AF I 0.750
TRIUR3_35254 Triticum urartu TRIUR3_35254 I 0.750
Traes_3AL_A30A3C355 Triticum aestivum Traes_3AL_A30A3C355 I 0.750
cassava1599.valid.m1 Manihot esculenta cassava1599.valid.m1 I 0.750
ORUFI01G34340 Oryza rufipogon ORUFI01G34340 I 0.738
BRADI2G19867 Brachypodium distachyon BRADI2G19867 I 0.738
OMERI01G28330 Oryza meridionalis OMERI01G28330 I 0.738
ARF3 Oryza sativa OS01G0753500 I 0.738
ONIVA01G35630 Oryza nivara ONIVA01G35630 I 0.738
BGIOSGA000812 Oryza indica BGIOSGA000812 I 0.738
OB01G40150 Oryza brachyantha OB01G40150 I 0.738
BRADI2G46190 Brachypodium distachyon BRADI2G46190 I 0.738
OGLUM01G35360 Oryza glumaepatula OGLUM01G35360 I 0.738
OBART01G31160 Oryza barthii OBART01G31160 I 0.738
BRADI2G50120 Brachypodium distachyon BRADI2G50120 I 0.738
OLONG_019459 Oryza longistaminata OLONG_019459 I 0.738
Cucsa.052860 Cucumis sativus Cucsa.052860 I 0.738
OPUNC05G20300 Oryza punctata OPUNC05G20300 I 0.725
OPUNC01G30260 Oryza punctata OPUNC01G30260 I 0.725
Cla000568 Citrullus lanatus Cla000568 I 0.725
GSMUA_Achr7G25330_001 Musa acuminata GSMUA_Achr7G25330_001 I 0.725
PDK_20s1651081g001 Phoenix dactylifera PDK_20s1651081g001 I 0.721
Traes_3DL_1FC3735D9 Triticum aestivum Traes_3DL_1FC3735D9 I 0.718
Eucgr.K02197 Eucalyptus grandis Eucgr.K02197 I 0.718
GLYMA11G15910 Glycine max GLYMA11G15910 I 0.714
Thhalv10012074m.g Eutrema salsugineum Thhalv10012074m.g I 0.713
OGLUM05G23980 Oryza glumaepatula OGLUM05G23980 I 0.713
OBART05G22670 Oryza barthii OBART05G22670 I 0.713
OB05G30280 Oryza brachyantha OB05G30280 I 0.713
ARF3 Arabidopsis thaliana AT2G33860 D 0.713
Bo4g182310 Brassica oleracea Bo4g182310 I 0.713
ONIVA05G23630 Oryza nivara ONIVA05G23630 I 0.713
Thhalv10016394m.g Eutrema salsugineum Thhalv10016394m.g I 0.713
OMERI05G20390 Oryza meridionalis OMERI05G20390 I 0.713
Bostr.23794s0705 Boechera stricta Bostr.23794s0705 I 0.713
ETT Arabidopsis lyrata scaffold_401977.1 I 0.713
Cagra.1195s0014 Capsella grandiflora Cagra.1195s0014 I 0.713
Carubv10025185m.g Capsella rubella Carubv10025185m.g I 0.713
ORGLA05G0198900 Oryza glaberrima ORGLA05G0198900 I 0.713
cassava830.valid.m1 Manihot esculenta cassava830.valid.m1 I 0.704
30111.m000734 Ricinus communis 30111.m000734 I 0.704
AMTR_s00057p00141830 Amborella trichopoda AMTR_s00057p00141830 I 0.700
ORUFI05G24090 Oryza rufipogon ORUFI05G24090 I 0.700
Bra021885 Brassica rapa Bra021885 I 0.700
GSMUA_Achr7G11000_001 Musa acuminata GSMUA_Achr7G11000_001 I 0.700
OS05G0515400 Oryza sativa OS05G0515400 I 0.700