PDK_20s1421941g001 (Phoenix dactylifera)
B3

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF02362 (B3) IPR003340 PDK_20s1421941g001 T024467_2.00 Superfamily (2010-Oct-26)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
ARF3
M00852_2.00
Arabidopsis thaliana
NKGTYBNN

NNVRACMN
PBM
Franco-Zorrilla et al.(2014)
ETTIN
0.818 0.818
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
PDK_20s1421941g001 B3 1 67

Links

Other B3 family TFs
Other Phoenix dactylifera TFs

102 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
PDK_20s1465161g002 Phoenix dactylifera PDK_20s1465161g002 I 0.894
Gorai.011G030900 Gossypium raimondii Gorai.011G030900 I 0.879
MTR_2g014770 Medicago truncatula MTR_2g014770 I 0.864
GLYMA13G24240 Glycine max GLYMA13G24240 I 0.864
mgf016063m Mimulus guttatus mgf016063m I 0.864
TCM_029792 Theobroma cacao TCM_029792 I 0.864
GLYMA07G32300 Glycine max GLYMA07G32300 I 0.864
evm.TU.supercontig_7.3 Carica papaya evm.TU.supercontig_7.3 I 0.864
Gorai.009G166100 Gossypium raimondii Gorai.009G166100 I 0.864
PDK_20s1663351g001 Phoenix dactylifera PDK_20s1663351g001 I 0.864
Gorai.010G157400 Gossypium raimondii Gorai.010G157400 I 0.848
MTR_4g088210 Medicago truncatula MTR_4g088210 I 0.848
POPTR_0004s04970 Populus trichocarpa POPTR_0004s04970 I 0.848
POPTR_0011s05830 Populus trichocarpa POPTR_0011s05830 I 0.848
Pm031349 Prunus mume Pm031349 I 0.848
Aquca_051_00062 Aquilegia coerulea Aquca_051_00062 I 0.848
Ciclev10000976m.g Citrus clementina Ciclev10000976m.g I 0.848
Ca_06352 Cicer arietinum Ca_06352 I 0.848
PRUPE_ppa002065m1g Prunus persica PRUPE_ppa002065m1g I 0.848
SapurV1A.0032s0660 Salix purpurea SapurV1A.0032s0660 I 0.848
SapurV1A.0012s0780 Salix purpurea SapurV1A.0012s0780 I 0.848
PK18282.1 Cannabis sativa PK18282.1 I 0.848
GLYMA15G08540 Glycine max GLYMA15G08540 I 0.848
GRMZM2G030710 Zea mays GRMZM2G030710 I 0.848
Pavir.Ca00928 Panicum virgatum Pavir.Ca00928 I 0.848
orange1.1g012439m.g Citrus sinensis orange1.1g012439m.g I 0.848
Bo9g143570 Brassica oleracea Bo9g143570 I 0.833
TRIUR3_33948 Triticum urartu TRIUR3_33948 I 0.833
Aquca_027_00067 Aquilegia coerulea Aquca_027_00067 I 0.833
cassava6009.valid.m1 Manihot esculenta cassava6009.valid.m1 I 0.833
POPTR_0009s01700 Populus trichocarpa POPTR_0009s01700 I 0.833
ARF4 Vitis vinifera VIT_06s0004g03130 I 0.833
Bostr.26833s0196 Boechera stricta Bostr.26833s0196 I 0.833
ARF4 Arabidopsis thaliana AT5G60450 I 0.833
29900.m001540 Ricinus communis 29900.m001540 I 0.833
Eucgr.D00588 Eucalyptus grandis Eucgr.D00588 I 0.833
Bra002479 Brassica rapa Bra002479 I 0.833
Cagra.2519s0017 Capsella grandiflora Cagra.2519s0017 I 0.833
LjSGA_103336.1 Lotus japonicus LjSGA_103336.1 I 0.833
LjSGA_059669.1 Lotus japonicus LjSGA_059669.1 I 0.833
GSMUA_Achr7G25330_001 Musa acuminata GSMUA_Achr7G25330_001 I 0.833
F775_32247 Aegilops tauschii F775_32247 I 0.833
Thhalv10012728m.g Eutrema salsugineum Thhalv10012728m.g I 0.833
PK07904.1 Cannabis sativa PK07904.1 I 0.833
Carubv10025912m.g Capsella rubella Carubv10025912m.g I 0.833
orange1.1g003580m.g Citrus sinensis orange1.1g003580m.g I 0.818
MDP0000225980 Malus domestica MDP0000225980 I 0.818
gene28545-v1.0-hybrid Fragaria vesca gene28545-v1.0-hybrid I 0.818
Ciclev10027839m.g Citrus clementina Ciclev10027839m.g I 0.818
cassava1599.valid.m1 Manihot esculenta cassava1599.valid.m1 I 0.818
evm.TU.supercontig_139.80 Carica papaya evm.TU.supercontig_139.80 I 0.818
Pm000994 Prunus mume Pm000994 I 0.818
TRIUR3_14814 Triticum urartu TRIUR3_14814 I 0.818
Solyc11g069190.1 Solanum lycopersicum Solyc11g069190.1 I 0.818
PRUPE_ppa001557mg Prunus persica PRUPE_ppa001557mg I 0.818
PGSC0003DMG400008065 Solanum tuberosum PGSC0003DMG400008065 I 0.818
ARF4 Arabidopsis lyrata fgenesh2_kg.8__2008__AT5G60450.1 I 0.818
MLOC_38232 Hordeum vulgare MLOC_38232 I 0.818
BRADI2G19867 Brachypodium distachyon BRADI2G19867 I 0.818
GLYMA12G07560 Glycine max GLYMA12G07560 I 0.818
Traes_1AL_B14FE48AF Triticum aestivum Traes_1AL_B14FE48AF I 0.818
Traes_1DL_92BCA55C0 Triticum aestivum Traes_1DL_92BCA55C0 I 0.818
OMERI01G28330 Oryza meridionalis OMERI01G28330 I 0.803
Traes_3AL_A30A3C355 Triticum aestivum Traes_3AL_A30A3C355 I 0.803
ONIVA01G35630 Oryza nivara ONIVA01G35630 I 0.803
MDP0000412781 Malus domestica MDP0000412781 I 0.803
OLONG_019459 Oryza longistaminata OLONG_019459 I 0.803
BGIOSGA000812 Oryza indica BGIOSGA000812 I 0.803
MTR_2g093740 Medicago truncatula MTR_2g093740 I 0.803
OGLUM01G35360 Oryza glumaepatula OGLUM01G35360 I 0.803
GSMUA_Achr7G11000_001 Musa acuminata GSMUA_Achr7G11000_001 I 0.803
OBART01G31160 Oryza barthii OBART01G31160 I 0.803
GLYMA12G29280 Glycine max GLYMA12G29280 I 0.803
Bo2g024860 Brassica oleracea Bo2g024860 I 0.803
BRADI2G50120 Brachypodium distachyon BRADI2G50120 I 0.803
TRIUR3_35254 Triticum urartu TRIUR3_35254 I 0.803
ARF3 Oryza sativa OS01G0753500 I 0.803
OB01G40150 Oryza brachyantha OB01G40150 I 0.803
ORUFI01G34340 Oryza rufipogon ORUFI01G34340 I 0.803
OPUNC01G30260 Oryza punctata OPUNC01G30260 I 0.788
Bra021885 Brassica rapa Bra021885 I 0.788
Cucsa.046570 Cucumis sativus Cucsa.046570 I 0.788
LPERR01G26810 Leersia perrieri LPERR01G26810 I 0.788
Cla009812 Citrullus lanatus Cla009812 I 0.788
OMERI05G20390 Oryza meridionalis OMERI05G20390 I 0.773
ORGLA05G0198900 Oryza glaberrima ORGLA05G0198900 I 0.773
ONIVA05G23630 Oryza nivara ONIVA05G23630 I 0.773
OPUNC05G20300 Oryza punctata OPUNC05G20300 I 0.773
OGLUM05G23980 Oryza glumaepatula OGLUM05G23980 I 0.773
OBART05G22670 Oryza barthii OBART05G22670 I 0.773
mgf011102m Mimulus guttatus mgf011102m I 0.758
OS05G0515400 Oryza sativa OS05G0515400 I 0.758
Ca_02516 Cicer arietinum Ca_02516 N 0.758
ORUFI05G24090 Oryza rufipogon ORUFI05G24090 I 0.758
Traes_3DL_5C378695E Triticum aestivum Traes_3DL_5C378695E I 0.758
TRAES3BF097400050CFD_g Triticum aestivum TRAES3BF097400050CFD_g I 0.742
Si004598m.g Setaria italica Si004598m.g I 0.742
Pavir.Eb02716 Panicum virgatum Pavir.Eb02716 I 0.742
OB05G33320 Oryza brachyantha OB05G33320 I 0.727
GLYMA13G40310 Glycine max GLYMA13G40310 I 0.712
GSMUA_Achr10G26140_001 Musa acuminata GSMUA_Achr10G26140_001 I 0.712
Ca_14590 Cicer arietinum Ca_14590 I 0.712