PDK_20s1428911g001 (Phoenix dactylifera)
B3

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF02362 (B3) IPR003340 PDK_20s1428911g001 T024468_2.00 Superfamily (2010-Oct-26)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ARF2
M06714_2.00 		Arabidopsis thaliana
NHTGTCKSHD
HDSMGACADN		 Dap-seq
OMalley et al.(2016)
ARF2_col_v31 		0.805 0.805
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
PDK_20s1428911g001 B3 9 49

Links

Other B3 family TFs
Other Phoenix dactylifera TFs

189 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
OBART11G15270 Oryza barthii OBART11G15270 I 0.829
OGLUM11G14710 Oryza glumaepatula OGLUM11G14710 I 0.829
OLONG_022378 Oryza longistaminata OLONG_022378 I 0.829
OB12G20020 Oryza brachyantha OB12G20020 I 0.829
OB11G21910 Oryza brachyantha OB11G21910 I 0.829
GRMZM2G352159 Zea mays GRMZM2G352159 I 0.829
LPERR11G11950 Leersia perrieri LPERR11G11950 I 0.829
OMERI11G12590 Oryza meridionalis OMERI11G12590 I 0.829
ONIVA12G10760 Oryza nivara ONIVA12G10760 I 0.829
Pavir.Cb00753 Panicum virgatum Pavir.Cb00753 I 0.829
Pavir.J11622 Panicum virgatum Pavir.J11622 I 0.829
OS11G0523800 Oryza sativa OS11G0523800 I 0.829
ORUFI11G16290 Oryza rufipogon ORUFI11G16290 I 0.829
OPUNC11G12650 Oryza punctata OPUNC11G12650 I 0.829
ORGLA11G0129300 Oryza glaberrima ORGLA11G0129300 I 0.829
GRMZM2G006042 Zea mays GRMZM2G006042 I 0.829
Si021216m.g Setaria italica Si021216m.g I 0.829
ARF23 Oryza indica BGIOSGA033901 I 0.829
Cucsa.156920 Cucumis sativus Cucsa.156920 I 0.805
OMERI01G39560 Oryza meridionalis OMERI01G39560 I 0.805
Bo2g161810 Brassica oleracea Bo2g161810 I 0.805
ONIVA01G48620 Oryza nivara ONIVA01G48620 I 0.805
cassava17840.valid.m1 Manihot esculenta cassava17840.valid.m1 I 0.805
cassava37256.valid.m1 Manihot esculenta cassava37256.valid.m1 I 0.805
Bo3g108130 Brassica oleracea Bo3g108130 I 0.805
mgf006511m Mimulus guttatus mgf006511m I 0.805
Bra010048 Brassica rapa Bra010048 I 0.805
PRUPE_ppa001392mg Prunus persica PRUPE_ppa001392mg I 0.805
OBART01G42570 Oryza barthii OBART01G42570 I 0.805
Bo9g014770 Brassica oleracea Bo9g014770 I 0.805
mgf015308m Mimulus guttatus mgf015308m I 0.805
OGLUM01G46840 Oryza glumaepatula OGLUM01G46840 I 0.805
OPUNC01G41560 Oryza punctata OPUNC01G41560 I 0.805
cassava17839.valid.m1 Manihot esculenta cassava17839.valid.m1 I 0.805
BGIOSGA005099 Oryza indica BGIOSGA005099 I 0.805
Sb03g044630 Sorghum bicolor Sb03g044630 I 0.805
ARF2 Arabidopsis lyrata scaffold_802850.1 I 0.805
PGSC0003DMG400014452 Solanum tuberosum PGSC0003DMG400014452 I 0.805
Solyc03g118290.2 Solanum lycopersicum Solyc03g118290.2 I 0.805
Solyc12g042070.1 Solanum lycopersicum Solyc12g042070.1 I 0.805
ARF4 Oryza sativa OS01G0927600 I 0.805
ARF2 Vitis vinifera VIT_17s0000g00320 I 0.805
ORGLA01G0363100 Oryza glaberrima ORGLA01G0363100 I 0.805
Pm024588 Prunus mume Pm024588 I 0.805
Cla019614 Citrullus lanatus Cla019614 I 0.805
ORUFI01G45980 Oryza rufipogon ORUFI01G45980 I 0.805
Ca_05681 Cicer arietinum Ca_05681 I 0.805
Bostr.26833s0038 Boechera stricta Bostr.26833s0038 I 0.805
Cagra.4553s0009 Capsella grandiflora Cagra.4553s0009 I 0.805
POPTR_0015s11660 Populus trichocarpa POPTR_0015s11660 I 0.805
GLYMA08G01100 Glycine max GLYMA08G01100 I 0.805
POPTR_0012s10790 Populus trichocarpa POPTR_0012s10790 I 0.805
Pavir.Eb03734 Panicum virgatum Pavir.Eb03734 I 0.805
GRMZM2G338259 Zea mays GRMZM2G338259 I 0.805
GRMZM2G116557 Zea mays GRMZM2G116557 I 0.805
Thhalv10003641m.g Eutrema salsugineum Thhalv10003641m.g I 0.805
GLYMA06G17320 Glycine max GLYMA06G17320 I 0.805
LjSGA_068216.1 Lotus japonicus LjSGA_068216.1 I 0.805
PDK_20s1971021g001 Phoenix dactylifera PDK_20s1971021g001 I 0.805
chr4.CM0175.280.nc Lotus japonicus chr4.CM0175.280.nc I 0.805
PK16974.1 Cannabis sativa PK16974.1 I 0.805
GLYMA05G38540 Glycine max GLYMA05G38540 I 0.805
GLYMA04G37760 Glycine max GLYMA04G37760 I 0.805
Pavir.Ea03860 Panicum virgatum Pavir.Ea03860 I 0.805
GRMZM2G378580 Zea mays GRMZM2G378580 I 0.805
Bra035910 Brassica rapa Bra035910 I 0.805
Gorai.008G210200 Gossypium raimondii Gorai.008G210200 I 0.805
Gorai.001G054600 Gossypium raimondii Gorai.001G054600 I 0.805
gene06434-v1.0-hybrid Fragaria vesca gene06434-v1.0-hybrid I 0.805
Carubv10025860m.g Capsella rubella Carubv10025860m.g I 0.805
Ciclev10030696m.g Citrus clementina Ciclev10030696m.g I 0.805
Lus10032541.g Linum usitatissimum Lus10032541.g I 0.805
Lus10043200.g Linum usitatissimum Lus10043200.g I 0.805
GSMUA_Achr10G12070_001 Musa acuminata GSMUA_Achr10G12070_001 I 0.805
ARF2 Arabidopsis thaliana AT5G62000 D 0.805
orange1.1g004792m.g Citrus sinensis orange1.1g004792m.g I 0.805
MDP0000310875 Malus domestica MDP0000310875 I 0.805
MDP0000258032 Malus domestica MDP0000258032 I 0.805
GSMUA_Achr6G08090_001 Musa acuminata GSMUA_Achr6G08090_001 I 0.805
Si000340m.g Setaria italica Si000340m.g I 0.805
mgf020855m Mimulus guttatus mgf020855m I 0.780
SapurV1A.0774s0040 Salix purpurea SapurV1A.0774s0040 I 0.780
Pavir.J22605 Panicum virgatum Pavir.J22605 I 0.780
TRAES3BF001100080CFD_g Triticum aestivum TRAES3BF001100080CFD_g I 0.780
Traes_3AL_E34DF2F08 Triticum aestivum Traes_3AL_E34DF2F08 I 0.780
TRIUR3_17755 Triticum urartu TRIUR3_17755 I 0.780
BRADI2G59480 Brachypodium distachyon BRADI2G59480 I 0.780
MLOC_68907 Hordeum vulgare MLOC_68907 I 0.780
F775_32662 Aegilops tauschii F775_32662 I 0.780
F775_31280 Aegilops tauschii F775_31280 I 0.780
30128.m008545 Ricinus communis 30128.m008545 I 0.756
Pavir.Aa01676 Panicum virgatum Pavir.Aa01676 I 0.756
GRMZM2G702026 Zea mays GRMZM2G702026 I 0.756
VIT_01s0244g00150 Vitis vinifera VIT_01s0244g00150 I 0.756
MLOC_64596 Hordeum vulgare MLOC_64596 I 0.756
GSMUA_Achr6G12780_001 Musa acuminata GSMUA_Achr6G12780_001 I 0.756
F775_27540 Aegilops tauschii F775_27540 N 0.756
OB02G28170 Oryza brachyantha OB02G28170 I 0.756
OPUNC04G11520 Oryza punctata OPUNC04G11520 I 0.756
Eucgr.B03551 Eucalyptus grandis Eucgr.B03551 I 0.756
Si016562m.g Setaria italica Si016562m.g I 0.756
GSMUA_AchrUn_randomG14770_001 Musa acuminata GSMUA_AchrUn_randomG14770_001 I 0.756
ONIVA04G11850 Oryza nivara ONIVA04G11850 I 0.732
OMERI04G12260 Oryza meridionalis OMERI04G12260 I 0.732
Aquca_008_00175 Aquilegia coerulea Aquca_008_00175 I 0.732
OB04G20880 Oryza brachyantha OB04G20880 I 0.732
GSMUA_Achr10G16170_001 Musa acuminata GSMUA_Achr10G16170_001 I 0.732
SapurV1A.0499s0060 Salix purpurea SapurV1A.0499s0060 I 0.732
PK12669.1 Cannabis sativa PK12669.1 I 0.732
PDK_20s1585531g001 Phoenix dactylifera PDK_20s1585531g001 I 0.732
SapurV1A.0422s0040 Salix purpurea SapurV1A.0422s0040 I 0.732
BRADI3G45880 Brachypodium distachyon BRADI3G45880 I 0.732
MDP0000929655 Malus domestica MDP0000929655 I 0.732
Pavir.Ga01750 Panicum virgatum Pavir.Ga01750 I 0.732
Pavir.Gb01617 Panicum virgatum Pavir.Gb01617 I 0.732
GSMUA_Achr9G08310_001 Musa acuminata GSMUA_Achr9G08310_001 I 0.732
OGLUM04G13380 Oryza glumaepatula OGLUM04G13380 I 0.732
TCM_027113 Theobroma cacao TCM_027113 I 0.732
TCM_008374 Theobroma cacao TCM_008374 I 0.732
ORGLA04G0107000 Oryza glaberrima ORGLA04G0107000 I 0.732
PGSC0003DMG400020711 Solanum tuberosum PGSC0003DMG400020711 I 0.732
PGSC0003DMG400012261 Solanum tuberosum PGSC0003DMG400012261 I 0.732
ARF9 Oryza sativa OS04G0442000 I 0.732
ARF1 Vitis vinifera VIT_12s0035g01800 I 0.732
BGIOSGA016467 Oryza indica BGIOSGA016467 I 0.732
ORUFI04G14900 Oryza rufipogon ORUFI04G14900 I 0.732
Si009558m.g Setaria italica Si009558m.g I 0.732
AMTR_s00057p00141830 Amborella trichopoda AMTR_s00057p00141830 I 0.732
POPTR_0004s23770 Populus trichocarpa POPTR_0004s23770 I 0.732
Sb06g017490 Sorghum bicolor Sb06g017490 I 0.732
POPTR_0003s16210 Populus trichocarpa POPTR_0003s16210 I 0.732
GSMUA_Achr6G07390_001 Musa acuminata GSMUA_Achr6G07390_001 I 0.707
POPTR_0003s14200 Populus trichocarpa POPTR_0003s14200 I 0.707
LjSGA_059323.1 Lotus japonicus LjSGA_059323.1 I 0.707
orange1.1g005368m.g Citrus sinensis orange1.1g005368m.g I 0.707
VIT_02s0025g01740 Vitis vinifera VIT_02s0025g01740 I 0.707
MDP0000194603 Malus domestica MDP0000194603 I 0.707
PRUPE_ppa022314mg Prunus persica PRUPE_ppa022314mg I 0.707
GSMUA_Achr6G29070_001 Musa acuminata GSMUA_Achr6G29070_001 I 0.707
GLYMA18G40180 Glycine max GLYMA18G40180 I 0.707
PDK_20s1394651g001 Phoenix dactylifera PDK_20s1394651g001 I 0.707
ARF18 Arabidopsis lyrata fgenesh1_pg.C_scaffold_5002633 I 0.707
GLYMA03G17450 Glycine max GLYMA03G17450 I 0.707
VIT_15s0046g00290 Vitis vinifera VIT_15s0046g00290 I 0.707
SapurV1A.0003s1010 Salix purpurea SapurV1A.0003s1010 I 0.707
SapurV1A.0035s0230 Salix purpurea SapurV1A.0035s0230 I 0.707
SapurV1A.0340s0160 Salix purpurea SapurV1A.0340s0160 I 0.707
ARF18 Arabidopsis thaliana AT3G61830 I 0.707
POPTR_0001s10900 Populus trichocarpa POPTR_0001s10900 I 0.707
TCM_005126 Theobroma cacao TCM_005126 I 0.707
GLYMA07G16170 Glycine max GLYMA07G16170 I 0.707
GRMZM2G017187 Zea mays GRMZM2G017187 I 0.707
PK07332.1 Cannabis sativa PK07332.1 I 0.707
Thhalv10005857m.g Eutrema salsugineum Thhalv10005857m.g I 0.707
Gorai.007G026900 Gossypium raimondii Gorai.007G026900 I 0.707
cassava45425.m1 Manihot esculenta cassava45425.m1 I 0.707
cassava45424.m1 Manihot esculenta cassava45424.m1 I 0.707
cassava45423.m1 Manihot esculenta cassava45423.m1 I 0.707
cassava45426.m1 Manihot esculenta cassava45426.m1 I 0.707
Cucsa.078800 Cucumis sativus Cucsa.078800 I 0.707
Pm018352 Prunus mume Pm018352 I 0.707
Cucsa.114840 Cucumis sativus Cucsa.114840 I 0.707
cassava45422.m1 Manihot esculenta cassava45422.m1 I 0.707
cassava43609.valid.m1 Manihot esculenta cassava43609.valid.m1 I 0.707
Bo01141s010 Brassica oleracea Bo01141s010 I 0.707
cassava29828.valid.m1 Manihot esculenta cassava29828.valid.m1 I 0.707
Bo1g037360 Brassica oleracea Bo1g037360 I 0.707
cassava42787.valid.m1 Manihot esculenta cassava42787.valid.m1 I 0.707
cassava42788.valid.m1 Manihot esculenta cassava42788.valid.m1 I 0.707
cassava42790.valid.m1 Manihot esculenta cassava42790.valid.m1 I 0.707
cassava42789.valid.m1 Manihot esculenta cassava42789.valid.m1 I 0.707
e_gw1.64.107.1 Physcomitrella patens e_gw1.64.107.1 I 0.707
estExt_Genewise1.C_140304 Physcomitrella patens estExt_Genewise1.C_140304 I 0.707
evm.TU.supercontig_15.1 Carica papaya evm.TU.supercontig_15.1 I 0.707
Ca_21948 Cicer arietinum Ca_21948 I 0.707
MTR_4g021580 Medicago truncatula MTR_4g021580 I 0.707
evm.TU.supercontig_9.161 Carica papaya evm.TU.supercontig_9.161 I 0.707
evm.TU.supercontig_96.40 Carica papaya evm.TU.supercontig_96.40 I 0.707
Gorai.007G109500 Gossypium raimondii Gorai.007G109500 I 0.707
30068.m002516 Ricinus communis 30068.m002516 I 0.707
Ciclev10019174m.g Citrus clementina Ciclev10019174m.g I 0.707
MTR_7g062540 Medicago truncatula MTR_7g062540 I 0.707
PRUPE_ppa002230mg Prunus persica PRUPE_ppa002230mg I 0.707
Bo8g097320 Brassica oleracea Bo8g097320 I 0.707
Bra014419 Brassica rapa Bra014419 I 0.707
Aquca_003_00899 Aquilegia coerulea Aquca_003_00899 I 0.707
Ca_23296 Cicer arietinum Ca_23296 I 0.707
Cla013021 Citrullus lanatus Cla013021 I 0.707
Gorai.008G126200 Gossypium raimondii Gorai.008G126200 I 0.707