PDK_20s1477241g001 (Phoenix dactylifera)
B3

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF02362 (B3) IPR003340 PDK_20s1477241g001 T024472_2.00 Superfamily (2010-Oct-26)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
ARF2
M06714_2.00
Arabidopsis thaliana
NHTGTCKSHD

HDSMGACADN
Dap-seq
OMalley et al.(2016)
ARF2_col_v31
0.750 0.750
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
PDK_20s1477241g001 B3 1 72

Links

Other B3 family TFs
Other Phoenix dactylifera TFs

263 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
Ca_21948 Cicer arietinum Ca_21948 I 0.889
MTR_4g021580 Medicago truncatula MTR_4g021580 I 0.889
GLYMA03G17450 Glycine max GLYMA03G17450 I 0.875
Solyc01g096070.2 Solanum lycopersicum Solyc01g096070.2 I 0.875
GLYMA01G25270 Glycine max GLYMA01G25270 I 0.875
TCM_005126 Theobroma cacao TCM_005126 I 0.875
Cagra.0483s0062 Capsella grandiflora Cagra.0483s0062 I 0.875
VIT_15s0046g00290 Vitis vinifera VIT_15s0046g00290 I 0.875
Bostr.25993s0113 Boechera stricta Bostr.25993s0113 I 0.875
ARF11 Arabidopsis thaliana AT2G46530 I 0.875
30068.m002516 Ricinus communis 30068.m002516 I 0.875
Carubv10018954m.g Capsella rubella Carubv10018954m.g I 0.875
Thhalv10001365m.g Eutrema salsugineum Thhalv10001365m.g I 0.861
Gorai.003G078000 Gossypium raimondii Gorai.003G078000 I 0.861
cassava45426.m1 Manihot esculenta cassava45426.m1 I 0.861
cassava42787.valid.m1 Manihot esculenta cassava42787.valid.m1 I 0.861
cassava45425.m1 Manihot esculenta cassava45425.m1 I 0.861
POPTR_0001s10900 Populus trichocarpa POPTR_0001s10900 I 0.861
Gorai.001G153900 Gossypium raimondii Gorai.001G153900 I 0.861
POPTR_0002s17350 Populus trichocarpa POPTR_0002s17350 I 0.861
ARF11 Arabidopsis lyrata scaffold_403621.1 I 0.861
PGSC0003DMG400000118 Solanum tuberosum PGSC0003DMG400000118 I 0.861
SapurV1A.0035s0230 Salix purpurea SapurV1A.0035s0230 I 0.861
ARF18 Arabidopsis lyrata fgenesh1_pg.C_scaffold_5002633 I 0.861
PK02218.1 Cannabis sativa PK02218.1 I 0.861
Cucsa.114840 Cucumis sativus Cucsa.114840 I 0.861
ARF18 Arabidopsis thaliana AT3G61830 I 0.861
cassava45422.m1 Manihot esculenta cassava45422.m1 I 0.861
Bo01141s010 Brassica oleracea Bo01141s010 I 0.861
LjSGA_059323.1 Lotus japonicus LjSGA_059323.1 I 0.861
cassava42789.valid.m1 Manihot esculenta cassava42789.valid.m1 I 0.861
cassava42790.valid.m1 Manihot esculenta cassava42790.valid.m1 I 0.861
Bo3g039330 Brassica oleracea Bo3g039330 I 0.861
cassava42788.valid.m1 Manihot esculenta cassava42788.valid.m1 I 0.861
cassava45424.m1 Manihot esculenta cassava45424.m1 I 0.861
Bo8g097320 Brassica oleracea Bo8g097320 I 0.861
Bra014419 Brassica rapa Bra014419 I 0.861
cassava45423.m1 Manihot esculenta cassava45423.m1 I 0.861
POPTR_0003s14200 Populus trichocarpa POPTR_0003s14200 I 0.847
GLYMA16G02650 Glycine max GLYMA16G02650 I 0.847
cassava43609.valid.m1 Manihot esculenta cassava43609.valid.m1 I 0.847
SapurV1A.0003s1010 Salix purpurea SapurV1A.0003s1010 I 0.847
VIT_02s0025g01740 Vitis vinifera VIT_02s0025g01740 I 0.847
evm.TU.supercontig_96.40 Carica papaya evm.TU.supercontig_96.40 I 0.847
Bra004530 Brassica rapa Bra004530 I 0.847
Cla013021 Citrullus lanatus Cla013021 I 0.847
GLYMA07G06060 Glycine max GLYMA07G06060 I 0.847
Bo4g008150 Brassica oleracea Bo4g008150 I 0.847
Lus10032413.g Linum usitatissimum Lus10032413.g I 0.833
MDP0000194603 Malus domestica MDP0000194603 I 0.833
Lus10023058.g Linum usitatissimum Lus10023058.g I 0.833
cassava29828.valid.m1 Manihot esculenta cassava29828.valid.m1 I 0.833
Eucgr.D01764 Eucalyptus grandis Eucgr.D01764 I 0.833
MDP0000139073 Malus domestica MDP0000139073 I 0.833
POPTR_0014s09560 Populus trichocarpa POPTR_0014s09560 I 0.833
Pm018352 Prunus mume Pm018352 I 0.833
TCM_016500 Theobroma cacao TCM_016500 I 0.833
Cucsa.078800 Cucumis sativus Cucsa.078800 I 0.833
Aquca_013_00067 Aquilegia coerulea Aquca_013_00067 I 0.833
Bostr.13158s0186 Boechera stricta Bostr.13158s0186 I 0.833
PRUPE_ppa002230mg Prunus persica PRUPE_ppa002230mg I 0.833
PRUPE_ppa002617mg Prunus persica PRUPE_ppa002617mg I 0.833
Pm024149 Prunus mume Pm024149 I 0.833
Gorai.008G126200 Gossypium raimondii Gorai.008G126200 I 0.833
PK07332.1 Cannabis sativa PK07332.1 I 0.833
SapurV1A.0013s0230 Salix purpurea SapurV1A.0013s0230 I 0.833
Thhalv10005857m.g Eutrema salsugineum Thhalv10005857m.g I 0.833
GLYMA07G16170 Glycine max GLYMA07G16170 I 0.833
GLYMA03G41920 Glycine max GLYMA03G41920 I 0.833
Carubv10022841m.g Capsella rubella Carubv10022841m.g I 0.819
gene25123-v1.0-hybrid Fragaria vesca gene25123-v1.0-hybrid I 0.819
Cagra.0050s0046 Capsella grandiflora Cagra.0050s0046 I 0.819
SapurV1A.1529s0070 Salix purpurea SapurV1A.1529s0070 I 0.819
PDK_20s1394651g001 Phoenix dactylifera PDK_20s1394651g001 I 0.819
mgf005549m Mimulus guttatus mgf005549m I 0.819
Gorai.007G026900 Gossypium raimondii Gorai.007G026900 I 0.819
GSMUA_Achr10G15100_001 Musa acuminata GSMUA_Achr10G15100_001 I 0.806
Ca_23296 Cicer arietinum Ca_23296 I 0.806
GLYMA18G40180 Glycine max GLYMA18G40180 I 0.806
Ciclev10019131m.g Citrus clementina Ciclev10019131m.g I 0.806
Eucgr.E00888 Eucalyptus grandis Eucgr.E00888 I 0.806
GSMUA_Achr7G24330_001 Musa acuminata GSMUA_Achr7G24330_001 I 0.806
orange1.1g005491m.g Citrus sinensis orange1.1g005491m.g I 0.806
MTR_7g062540 Medicago truncatula MTR_7g062540 I 0.806
Bo1g037360 Brassica oleracea Bo1g037360 I 0.792
POPTR_0004s23770 Populus trichocarpa POPTR_0004s23770 I 0.792
chr1.LjT43L07.10.nd Lotus japonicus chr1.LjT43L07.10.nd I 0.792
Bostr.7867s0204 Boechera stricta Bostr.7867s0204 I 0.792
Thhalv10024554m.g Eutrema salsugineum Thhalv10024554m.g I 0.792
ARF9 Arabidopsis lyrata Al_scaffold_0007_1752 I 0.792
AMTR_s00057p00141830 Amborella trichopoda AMTR_s00057p00141830 I 0.792
PDK_20s1585531g001 Phoenix dactylifera PDK_20s1585531g001 I 0.792
Solyc08g008380.2 Solanum lycopersicum Solyc08g008380.2 I 0.792
PK12669.1 Cannabis sativa PK12669.1 I 0.792
ARF9 Arabidopsis thaliana AT4G23980 I 0.792
SapurV1A.0422s0040 Salix purpurea SapurV1A.0422s0040 I 0.778
LjSGA_022281.1 Lotus japonicus LjSGA_022281.1 I 0.778
GSMUA_AchrUn_randomG11300_001 Musa acuminata GSMUA_AchrUn_randomG11300_001 I 0.778
MTR_2g005240 Medicago truncatula MTR_2g005240 I 0.778
GRMZM2G116557 Zea mays GRMZM2G116557 I 0.778
F775_31280 Aegilops tauschii F775_31280 I 0.778
GLYMA16G00220 Glycine max GLYMA16G00220 I 0.778
Traes_3DL_1FC3735D9 Triticum aestivum Traes_3DL_1FC3735D9 I 0.778
Bra013748 Brassica rapa Bra013748 I 0.778
orange1.1g005368m.g Citrus sinensis orange1.1g005368m.g I 0.778
Bra019255 Brassica rapa Bra019255 I 0.778
Ciclev10019174m.g Citrus clementina Ciclev10019174m.g I 0.778
Bo7g109250 Brassica oleracea Bo7g109250 I 0.778
evm.TU.supercontig_15.1 Carica papaya evm.TU.supercontig_15.1 I 0.778
Gorai.007G109500 Gossypium raimondii Gorai.007G109500 I 0.778
ARF1 Vitis vinifera VIT_12s0035g01800 I 0.778
Solyc03g118290.2 Solanum lycopersicum Solyc03g118290.2 I 0.764
mgf006511m Mimulus guttatus mgf006511m I 0.764
ARF2 Vitis vinifera VIT_17s0000g00320 I 0.764
Cla019614 Citrullus lanatus Cla019614 I 0.764
Cucsa.156920 Cucumis sativus Cucsa.156920 I 0.764
chr4.CM0175.280.nc Lotus japonicus chr4.CM0175.280.nc I 0.764
Traes_3DL_BC7A7E056 Triticum aestivum Traes_3DL_BC7A7E056 I 0.764
PK16974.1 Cannabis sativa PK16974.1 I 0.764
BRADI2G59480 Brachypodium distachyon BRADI2G59480 I 0.764
mgf015308m Mimulus guttatus mgf015308m I 0.764
TRAES3BF001100080CFD_g Triticum aestivum TRAES3BF001100080CFD_g I 0.764
TCM_027113 Theobroma cacao TCM_027113 I 0.764
F775_32662 Aegilops tauschii F775_32662 I 0.764
POPTR_0015s11660 Populus trichocarpa POPTR_0015s11660 I 0.764
GRMZM2G338259 Zea mays GRMZM2G338259 I 0.764
PGSC0003DMG400012261 Solanum tuberosum PGSC0003DMG400012261 I 0.764
MDP0000258032 Malus domestica MDP0000258032 I 0.764
PGSC0003DMG400020711 Solanum tuberosum PGSC0003DMG400020711 I 0.764
GSMUA_Achr9G08310_001 Musa acuminata GSMUA_Achr9G08310_001 I 0.764
Eucgr.G00076 Eucalyptus grandis Eucgr.G00076 I 0.764
Pavir.Ea03860 Panicum virgatum Pavir.Ea03860 I 0.764
Gorai.001G054600 Gossypium raimondii Gorai.001G054600 I 0.764
gene06434-v1.0-hybrid Fragaria vesca gene06434-v1.0-hybrid I 0.764
Pavir.Eb03734 Panicum virgatum Pavir.Eb03734 I 0.764
Gorai.008G210200 Gossypium raimondii Gorai.008G210200 I 0.764
POPTR_0012s10790 Populus trichocarpa POPTR_0012s10790 I 0.764
MTR_8g100050 Medicago truncatula MTR_8g100050 I 0.764
GLYMA04G37760 Glycine max GLYMA04G37760 I 0.764
Sb03g044630 Sorghum bicolor Sb03g044630 I 0.764
MDP0000929655 Malus domestica MDP0000929655 I 0.764
LPERR12G09930 Leersia perrieri LPERR12G09930 I 0.764
Si000340m.g Setaria italica Si000340m.g I 0.764
GLYMA06G17320 Glycine max GLYMA06G17320 I 0.764
MLOC_68907 Hordeum vulgare MLOC_68907 I 0.764
Aquca_008_00175 Aquilegia coerulea Aquca_008_00175 I 0.764
Eucgr.K02197 Eucalyptus grandis Eucgr.K02197 I 0.761
Lus10043200.g Linum usitatissimum Lus10043200.g I 0.750
LjSGA_068216.1 Lotus japonicus LjSGA_068216.1 I 0.750
MDP0000310875 Malus domestica MDP0000310875 I 0.750
Lus10032541.g Linum usitatissimum Lus10032541.g I 0.750
Ciclev10030696m.g Citrus clementina Ciclev10030696m.g I 0.750
orange1.1g004792m.g Citrus sinensis orange1.1g004792m.g I 0.750
Bostr.26833s0038 Boechera stricta Bostr.26833s0038 I 0.750
SapurV1A.0672s0210 Salix purpurea SapurV1A.0672s0210 I 0.750
SapurV1A.0774s0040 Salix purpurea SapurV1A.0774s0040 I 0.750
SapurV1A.0517s0240 Salix purpurea SapurV1A.0517s0240 I 0.750
Thhalv10003641m.g Eutrema salsugineum Thhalv10003641m.g I 0.750
Pavir.J11622 Panicum virgatum Pavir.J11622 I 0.750
mgf020855m Mimulus guttatus mgf020855m I 0.750
Carubv10025860m.g Capsella rubella Carubv10025860m.g I 0.750
Cagra.4553s0009 Capsella grandiflora Cagra.4553s0009 I 0.750
Pavir.Cb00753 Panicum virgatum Pavir.Cb00753 I 0.750
Solyc12g042070.1 Solanum lycopersicum Solyc12g042070.1 I 0.750
OGLUM04G13380 Oryza glumaepatula OGLUM04G13380 I 0.750
OGLUM11G14710 Oryza glumaepatula OGLUM11G14710 I 0.750
cassava37256.valid.m1 Manihot esculenta cassava37256.valid.m1 I 0.750
OGLUM01G46840 Oryza glumaepatula OGLUM01G46840 I 0.750
OBART11G15270 Oryza barthii OBART11G15270 I 0.750
OB11G21910 Oryza brachyantha OB11G21910 I 0.750
OB12G20020 Oryza brachyantha OB12G20020 I 0.750
OMERI04G12260 Oryza meridionalis OMERI04G12260 I 0.750
OMERI11G12590 Oryza meridionalis OMERI11G12590 I 0.750
ORGLA04G0107000 Oryza glaberrima ORGLA04G0107000 I 0.750
ORGLA11G0129300 Oryza glaberrima ORGLA11G0129300 I 0.750
OPUNC11G12650 Oryza punctata OPUNC11G12650 I 0.750
OPUNC01G41560 Oryza punctata OPUNC01G41560 I 0.750
ONIVA04G11850 Oryza nivara ONIVA04G11850 I 0.750
ONIVA12G10760 Oryza nivara ONIVA12G10760 I 0.750
OB04G20880 Oryza brachyantha OB04G20880 I 0.750
LPERR11G11950 Leersia perrieri LPERR11G11950 I 0.750
Bo3g108130 Brassica oleracea Bo3g108130 I 0.750
Bo9g014770 Brassica oleracea Bo9g014770 I 0.750
Bo2g161810 Brassica oleracea Bo2g161810 I 0.750
ARF23 Oryza indica BGIOSGA033901 I 0.750
ARF2 Arabidopsis thaliana AT5G62000 D 0.750
BGIOSGA016467 Oryza indica BGIOSGA016467 I 0.750
Bra010048 Brassica rapa Bra010048 I 0.750
Bra035910 Brassica rapa Bra035910 I 0.750
GSMUA_Achr10G12070_001 Musa acuminata GSMUA_Achr10G12070_001 I 0.750
GSMUA_Achr6G08090_001 Musa acuminata GSMUA_Achr6G08090_001 I 0.750
GRMZM2G352159 Zea mays GRMZM2G352159 I 0.750
GRMZM2G006042 Zea mays GRMZM2G006042 I 0.750
GLYMA05G38540 Glycine max GLYMA05G38540 I 0.750
GLYMA08G01100 Glycine max GLYMA08G01100 I 0.750
ORUFI04G14900 Oryza rufipogon ORUFI04G14900 I 0.750
OLONG_022378 Oryza longistaminata OLONG_022378 I 0.750
TCM_014743 Theobroma cacao TCM_014743 I 0.750
TCM_008374 Theobroma cacao TCM_008374 I 0.750
ARF2 Arabidopsis lyrata scaffold_802850.1 I 0.750
Sb08g014320 Sorghum bicolor Sb08g014320 I 0.750
TRIUR3_17755 Triticum urartu TRIUR3_17755 I 0.750
VIT_01s0244g00150 Vitis vinifera VIT_01s0244g00150 I 0.750
cassava17840.valid.m1 Manihot esculenta cassava17840.valid.m1 I 0.750
cassava17839.valid.m1 Manihot esculenta cassava17839.valid.m1 I 0.750
Pm024588 Prunus mume Pm024588 I 0.750
Ca_05681 Cicer arietinum Ca_05681 I 0.750
PRUPE_ppa001392mg Prunus persica PRUPE_ppa001392mg I 0.750
Si021216m.g Setaria italica Si021216m.g I 0.750
PGSC0003DMG400014452 Solanum tuberosum PGSC0003DMG400014452 I 0.750
OS11G0523800 Oryza sativa OS11G0523800 I 0.750
PGSC0003DMG400014179 Solanum tuberosum PGSC0003DMG400014179 I 0.750
ORUFI11G16290 Oryza rufipogon ORUFI11G16290 I 0.750
ARF9 Oryza sativa OS04G0442000 I 0.750
ORUFI01G45980 Oryza rufipogon ORUFI01G45980 I 0.736
BRADI4G17410 Brachypodium distachyon BRADI4G17410 I 0.736
Pavir.Aa01676 Panicum virgatum Pavir.Aa01676 I 0.736
ARF4 Oryza sativa OS01G0927600 I 0.736
ORGLA01G0363100 Oryza glaberrima ORGLA01G0363100 I 0.736
OPUNC04G11520 Oryza punctata OPUNC04G11520 I 0.736
GRMZM2G702026 Zea mays GRMZM2G702026 I 0.736
ONIVA01G48620 Oryza nivara ONIVA01G48620 I 0.736
Si016562m.g Setaria italica Si016562m.g I 0.736
GSMUA_Achr6G07390_001 Musa acuminata GSMUA_Achr6G07390_001 I 0.736
GSMUA_Achr6G12780_001 Musa acuminata GSMUA_Achr6G12780_001 I 0.736
BGIOSGA005099 Oryza indica BGIOSGA005099 I 0.736
OMERI01G39560 Oryza meridionalis OMERI01G39560 I 0.736
OBART01G42570 Oryza barthii OBART01G42570 I 0.736
Eucgr.B03551 Eucalyptus grandis Eucgr.B03551 I 0.736
POPTR_0014s12980 Populus trichocarpa POPTR_0014s12980 I 0.736
OB02G28170 Oryza brachyantha OB02G28170 I 0.736
Cucsa.303990 Cucumis sativus Cucsa.303990 I 0.722
GRMZM2G137413 Zea mays GRMZM2G137413 I 0.722
PDK_20s1869091g001 Phoenix dactylifera PDK_20s1869091g001 I 0.722
Gorai.007G131900 Gossypium raimondii Gorai.007G131900 I 0.722
PDK_20s1971021g001 Phoenix dactylifera PDK_20s1971021g001 I 0.722
Bostr.15774s0314 Boechera stricta Bostr.15774s0314 N 0.722
Pavir.Ab01961 Panicum virgatum Pavir.Ab01961 I 0.722
GSMUA_AchrUn_randomG14770_001 Musa acuminata GSMUA_AchrUn_randomG14770_001 I 0.722
GSMUA_Achr10G16170_001 Musa acuminata GSMUA_Achr10G16170_001 I 0.722
evm.TU.contig_31756 Carica papaya evm.TU.contig_31756 I 0.722
PRUPE_ppa022314mg Prunus persica PRUPE_ppa022314mg I 0.722
MLOC_64596 Hordeum vulgare MLOC_64596 I 0.722
BRADI2G46190 Brachypodium distachyon BRADI2G46190 I 0.708
BRADI4G07470 Brachypodium distachyon BRADI4G07470 I 0.708
Pm019941 Prunus mume Pm019941 I 0.708
AMTR_s00021p00200760 Amborella trichopoda AMTR_s00021p00200760 I 0.708
Cla011540 Citrullus lanatus Cla011540 I 0.708
Pavir.Ga01750 Panicum virgatum Pavir.Ga01750 I 0.708
Bostr.1040s0030 Boechera stricta Bostr.1040s0030 I 0.708
Si009558m.g Setaria italica Si009558m.g I 0.708
Sb06g017490 Sorghum bicolor Sb06g017490 I 0.708
Lus10013942.g Linum usitatissimum Lus10013942.g I 0.708
XM_002320618.1 Populus trichocarpa POPTR_0020s00210 I 0.708
gene29771-v1.0-hybrid Fragaria vesca gene29771-v1.0-hybrid I 0.708
TCM_004526 Theobroma cacao TCM_004526 I 0.708
Pavir.Gb01617 Panicum virgatum Pavir.Gb01617 I 0.708
Traes_2BL_1AED96909 Triticum aestivum Traes_2BL_1AED96909 I 0.708
F775_27540 Aegilops tauschii F775_27540 N 0.708
GLYMA07G32300 Glycine max GLYMA07G32300 I 0.708
GLYMA13G24240 Glycine max GLYMA13G24240 I 0.708
GRMZM2G378580 Zea mays GRMZM2G378580 I 0.708
BRADI5G10950 Brachypodium distachyon BRADI5G10950 I 0.708