PDK_20s1971021g001 (Phoenix dactylifera)
B3

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF02362 (B3) IPR003340 PDK_20s1971021g001 T024484_2.00 Superfamily (2010-Oct-26)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ARF2
M06714_2.00 		Arabidopsis thaliana
NHTGTCKSHD
HDSMGACADN		 Dap-seq
OMalley et al.(2016)
ARF2_col_v31 		0.753 0.753
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
PDK_20s1971021g001 B3 93 190

Links

Other B3 family TFs
Other Phoenix dactylifera TFs

50 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Ciclev10030696m.g Citrus clementina Ciclev10030696m.g I 0.944
Eucgr.K02197 Eucalyptus grandis Eucgr.K02197 I 0.930
PDK_20s1651081g001 Phoenix dactylifera PDK_20s1651081g001 I 0.930
Cucsa.156920 Cucumis sativus Cucsa.156920 I 0.930
Traes_3DL_1FC3735D9 Triticum aestivum Traes_3DL_1FC3735D9 I 0.887
GLYMA08G01100 Glycine max GLYMA08G01100 I 0.880
Traes_3DL_BC7A7E056 Triticum aestivum Traes_3DL_BC7A7E056 I 0.873
PDK_20s1428911g001 Phoenix dactylifera PDK_20s1428911g001 I 0.805
orange1.1g004792m.g Citrus sinensis orange1.1g004792m.g I 0.787
orange1.1g005491m.g Citrus sinensis orange1.1g005491m.g I 0.768
Cla019614 Citrullus lanatus Cla019614 I 0.764
ARF2 Vitis vinifera VIT_17s0000g00320 I 0.764
LjSGA_068216.1 Lotus japonicus LjSGA_068216.1 I 0.764
mgf006511m Mimulus guttatus mgf006511m I 0.764
gene06434-v1.0-hybrid Fragaria vesca gene06434-v1.0-hybrid I 0.764
PK16974.1 Cannabis sativa PK16974.1 I 0.764
MDP0000258032 Malus domestica MDP0000258032 I 0.764
Gorai.001G054600 Gossypium raimondii Gorai.001G054600 I 0.764
mgf015308m Mimulus guttatus mgf015308m I 0.764
POPTR_0012s10790 Populus trichocarpa POPTR_0012s10790 I 0.764
Solyc03g118290.2 Solanum lycopersicum Solyc03g118290.2 I 0.764
POPTR_0015s11660 Populus trichocarpa POPTR_0015s11660 I 0.764
Gorai.007G109500 Gossypium raimondii Gorai.007G109500 I 0.757
Pavir.Cb00753 Panicum virgatum Pavir.Cb00753 I 0.753
Lus10043200.g Linum usitatissimum Lus10043200.g I 0.753
Pavir.J11622 Panicum virgatum Pavir.J11622 I 0.753
Bo3g108130 Brassica oleracea Bo3g108130 I 0.753
GRMZM2G006042 Zea mays GRMZM2G006042 I 0.753
chr4.CM0175.280.nc Lotus japonicus chr4.CM0175.280.nc I 0.753
Bra010048 Brassica rapa Bra010048 I 0.753
Lus10032541.g Linum usitatissimum Lus10032541.g I 0.753
mgf020855m Mimulus guttatus mgf020855m I 0.753
Si021216m.g Setaria italica Si021216m.g I 0.753
Pavir.Eb03734 Panicum virgatum Pavir.Eb03734 I 0.742
Sb03g044630 Sorghum bicolor Sb03g044630 I 0.742
GRMZM2G352159 Zea mays GRMZM2G352159 I 0.742
Ca_05681 Cicer arietinum Ca_05681 I 0.742
Si000340m.g Setaria italica Si000340m.g I 0.742
GRMZM2G338259 Zea mays GRMZM2G338259 I 0.742
Pavir.Ea03860 Panicum virgatum Pavir.Ea03860 I 0.742
TCM_029792 Theobroma cacao TCM_029792 I 0.736
LjSGA_144865.1 Lotus japonicus LjSGA_144865.1 I 0.732
Eucgr.B03551 Eucalyptus grandis Eucgr.B03551 I 0.730
OB12G20020 Oryza brachyantha OB12G20020 I 0.730
GLYMA04G37760 Glycine max GLYMA04G37760 I 0.730
GLYMA06G17320 Glycine max GLYMA06G17320 I 0.730
AMTR_s00057p00141830 Amborella trichopoda AMTR_s00057p00141830 I 0.730
PDK_20s1477241g001 Phoenix dactylifera PDK_20s1477241g001 I 0.722
GSMUA_Achr10G12070_001 Musa acuminata GSMUA_Achr10G12070_001 I 0.714
TRIUR3_17755 Triticum urartu TRIUR3_17755 I 0.708