PDK_20s1971021g001 (Phoenix dactylifera)
B3

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF02362 (B3) IPR003340 PDK_20s1971021g001 T024484_2.00 Superfamily (2010-Oct-26)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
ARF2
M06714_2.00
Arabidopsis thaliana
NHTGTCKSHD

HDSMGACADN
Dap-seq
OMalley et al.(2016)
ARF2_col_v31
0.753 0.753
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
PDK_20s1971021g001 B3 93 190

Links

Other B3 family TFs
Other Phoenix dactylifera TFs

50 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
MYB105 Arabidopsis thaliana AT1G69560 D 0.000
MYB56 Arabidopsis thaliana AT5G17800 D 0.000
Ciclev10011967m.g Citrus clementina Ciclev10011967m.g I 0.000
mgf001214m Mimulus guttatus mgf001214m I 0.000
gw1.76.8.1 Physcomitrella patens gw1.76.8.1 I 0.000
gw1.74.13.1 Physcomitrella patens gw1.74.13.1 I 0.000
gw1.2.29.1 Physcomitrella patens gw1.2.29.1 I 0.000
gw1.200.30.1 Physcomitrella patens gw1.200.30.1 I 0.000
e_gw1.91.11.1 Physcomitrella patens e_gw1.91.11.1 I 0.000
e_gw1.39.24.1 Physcomitrella patens e_gw1.39.24.1 I 0.000
e_gw1.219.38.1 Physcomitrella patens e_gw1.219.38.1 I 0.000
Cucsa.337000 Cucumis sativus Cucsa.337000 I 0.000
Cucsa.284980 Cucumis sativus Cucsa.284980 I 0.000
Cucsa.189540 Cucumis sativus Cucsa.189540 I 0.000
Cucsa.016540 Cucumis sativus Cucsa.016540 I 0.000
cassava9262.m1 Manihot esculenta cassava9262.m1 I 0.000
mgf006675m Mimulus guttatus mgf006675m I 0.000
mgf018311m Mimulus guttatus mgf018311m I 0.000
mgf021546m Mimulus guttatus mgf021546m I 0.000
Carubv10021327m.g Capsella rubella Carubv10021327m.g I 0.000
Carubv10011887m.g Capsella rubella Carubv10011887m.g I 0.000
Carubv10001376m.g Capsella rubella Carubv10001376m.g I 0.000
Cagra.6254s0026 Capsella grandiflora Cagra.6254s0026 I 0.000
Cagra.1475s0003 Capsella grandiflora Cagra.1475s0003 I 0.000
Cagra.1150s0023 Capsella grandiflora Cagra.1150s0023 I 0.000
Cagra.0820s0004 Capsella grandiflora Cagra.0820s0004 I 0.000
Bostr.26527s0427 Boechera stricta Bostr.26527s0427 I 0.000
Bostr.12659s0321 Boechera stricta Bostr.12659s0321 I 0.000
Bostr.10273s0409 Boechera stricta Bostr.10273s0409 I 0.000
Bostr.0556s0551 Boechera stricta Bostr.0556s0551 I 0.000
Aquca_022_00293 Aquilegia coerulea Aquca_022_00293 I 0.000
Aquca_002_00639 Aquilegia coerulea Aquca_002_00639 I 0.000
cassava5849.m1 Manihot esculenta cassava5849.m1 I 0.000
cassava45348.m1 Manihot esculenta cassava45348.m1 I 0.000
cassava3020.m1 Manihot esculenta cassava3020.m1 I 0.000
VIT_01s0026g02600 Vitis vinifera VIT_01s0026g02600 I 0.000
TRIUR3_35269 Triticum urartu TRIUR3_35269 I 0.000
TRIUR3_29043 Triticum urartu TRIUR3_29043 I 0.000
Traes_4DS_F6E1A4F88 Triticum aestivum Traes_4DS_F6E1A4F88 I 0.000
Traes_4BS_189002AB8 Triticum aestivum Traes_4BS_189002AB8 I 0.000
Traes_4AL_7A841CAD2 Triticum aestivum Traes_4AL_7A841CAD2 I 0.000
TRAES3BF142600060CFD_g Triticum aestivum TRAES3BF142600060CFD_g I 0.000
TRAES3BF063000030CFD_g Triticum aestivum TRAES3BF063000030CFD_g I 0.000
TCM_033560 Theobroma cacao TCM_033560 I 0.000
TCM_013357 Theobroma cacao TCM_013357 I 0.000
TCM_011689 Theobroma cacao TCM_011689 I 0.000
Solyc10g081320.1 Solanum lycopersicum Solyc10g081320.1 I 0.000
Solyc05g007870.1 Solanum lycopersicum Solyc05g007870.1 I 0.000
VIT_14s0108g01010 Vitis vinifera VIT_14s0108g01010 I 0.000
Ca_08179 Cicer arietinum Ca_08179 I 0.000
Ca_16374 Cicer arietinum Ca_16374 I 0.000
cassava25953.m1 Manihot esculenta cassava25953.m1 I 0.000
cassava17309.m1 Manihot esculenta cassava17309.m1 I 0.000
cassava12378.valid.m1 Manihot esculenta cassava12378.valid.m1 I 0.000
cassava12017.valid.m1 Manihot esculenta cassava12017.valid.m1 I 0.000
30137.m000436 Ricinus communis 30137.m000436 I 0.000
30000.m000380 Ricinus communis 30000.m000380 I 0.000
29813.m001506 Ricinus communis 29813.m001506 I 0.000
28838.m000246 Ricinus communis 28838.m000246 I 0.000
Pm025457 Prunus mume Pm025457 I 0.000
Pm006483 Prunus mume Pm006483 I 0.000
Cla017770 Citrullus lanatus Cla017770 I 0.000
Cla010359 Citrullus lanatus Cla010359 I 0.000
Cla000326 Citrullus lanatus Cla000326 I 0.000
Solyc04g064540.2 Solanum lycopersicum Solyc04g064540.2 I 0.000
PDK_20s1403571g003 Phoenix dactylifera PDK_20s1403571g003 I 0.000
SapurV1A.0458s0070 Salix purpurea SapurV1A.0458s0070 I 0.000
SapurV1A.0438s0100 Salix purpurea SapurV1A.0438s0100 I 0.000
SapurV1A.0171s0440 Salix purpurea SapurV1A.0171s0440 I 0.000
SapurV1A.0149s0020 Salix purpurea SapurV1A.0149s0020 I 0.000
SapurV1A.0118s0380 Salix purpurea SapurV1A.0118s0380 I 0.000
SapurV1A.0074s0390 Salix purpurea SapurV1A.0074s0390 I 0.000
Pavir.J31094 Panicum virgatum Pavir.J31094 I 0.000
Pavir.J21755 Panicum virgatum Pavir.J21755 I 0.000
Pavir.J16832 Panicum virgatum Pavir.J16832 I 0.000
Pavir.J04678 Panicum virgatum Pavir.J04678 I 0.000
Pavir.Hb01200 Panicum virgatum Pavir.Hb01200 I 0.000
Pavir.Fb01599 Panicum virgatum Pavir.Fb01599 I 0.000
Pavir.Fa00885 Panicum virgatum Pavir.Fa00885 I 0.000
SapurV1A.1416s0010 Salix purpurea SapurV1A.1416s0010 I 0.000
SapurV1A.1660s0020 Salix purpurea SapurV1A.1660s0020 I 0.000
SapurV1A.1664s0020 Salix purpurea SapurV1A.1664s0020 I 0.000
PDK_20s1366461g001 Phoenix dactylifera PDK_20s1366461g001 I 0.000
chr2.CM0641.440.nd Lotus japonicus chr2.CM0641.440.nd I 0.000
PK28773.1 Cannabis sativa PK28773.1 I 0.000
PK20989.1 Cannabis sativa PK20989.1 I 0.000
PK17670.1 Cannabis sativa PK17670.1 I 0.000
PK01212.1 Cannabis sativa PK01212.1 I 0.000
Thhalv10028155m.g Eutrema salsugineum Thhalv10028155m.g I 0.000
Thhalv10019759m.g Eutrema salsugineum Thhalv10019759m.g I 0.000
Thhalv10014113m.g Eutrema salsugineum Thhalv10014113m.g I 0.000
Thhalv10008049m.g Eutrema salsugineum Thhalv10008049m.g I 0.000
Thhalv10004648m.g Eutrema salsugineum Thhalv10004648m.g I 0.000
SapurV1A.3733s0010 Salix purpurea SapurV1A.3733s0010 I 0.000
SapurV1A.2371s0030 Salix purpurea SapurV1A.2371s0030 I 0.000
Pavir.Ea01097 Panicum virgatum Pavir.Ea01097 I 0.000
Pavir.Cb01957 Panicum virgatum Pavir.Cb01957 I 0.000
orange1.1g047550m.g Citrus sinensis orange1.1g047550m.g I 0.000
Gorai.006G015200 Gossypium raimondii Gorai.006G015200 I 0.000
Gorai.005G142000 Gossypium raimondii Gorai.005G142000 I 0.000
gene29254-v1.0-hybrid Fragaria vesca gene29254-v1.0-hybrid I 0.000
gene09311-v1.0-hybrid Fragaria vesca gene09311-v1.0-hybrid I 0.000
evm.TU.supercontig_73.4 Carica papaya evm.TU.supercontig_73.4 I 0.000
evm.TU.supercontig_480.4 Carica papaya evm.TU.supercontig_480.4 I 0.000
evm.TU.supercontig_1.43 Carica papaya evm.TU.supercontig_1.43 I 0.000
Eucgr.K01542 Eucalyptus grandis Eucgr.K01542 I 0.000
Eucgr.G02492 Eucalyptus grandis Eucgr.G02492 I 0.000
Eucgr.A02150 Eucalyptus grandis Eucgr.A02150 I 0.000
Ciclev10031944m.g Citrus clementina Ciclev10031944m.g I 0.000
Ciclev10023285m.g Citrus clementina Ciclev10023285m.g I 0.000
Ciclev10021859m.g Citrus clementina Ciclev10021859m.g I 0.000
Gorai.007G346400 Gossypium raimondii Gorai.007G346400 I 0.000
Gorai.013G086400 Gossypium raimondii Gorai.013G086400 I 0.000
Gorai.013G196500 Gossypium raimondii Gorai.013G196500 I 0.000
orange1.1g046309m.g Citrus sinensis orange1.1g046309m.g I 0.000
orange1.1g025697m.g Citrus sinensis orange1.1g025697m.g I 0.000
MDP0000878006 Malus domestica MDP0000878006 I 0.000
MDP0000755899 Malus domestica MDP0000755899 I 0.000
MDP0000265114 Malus domestica MDP0000265114 I 0.000
MDP0000232291 Malus domestica MDP0000232291 I 0.000
MDP0000181178 Malus domestica MDP0000181178 I 0.000
MDP0000172476 Malus domestica MDP0000172476 I 0.000
MDP0000146675 Malus domestica MDP0000146675 I 0.000
MDP0000136541 Malus domestica MDP0000136541 I 0.000
Lus10030452.g Linum usitatissimum Lus10030452.g I 0.000
Lus10026611.g Linum usitatissimum Lus10026611.g I 0.000
Lus10005683.g Linum usitatissimum Lus10005683.g I 0.000
Ciclev10020631m.g Citrus clementina Ciclev10020631m.g I 0.000
Si026751m.g Setaria italica Si026751m.g I 0.000
MTR_5g041570 Medicago truncatula MTR_5g041570 I 0.000
GSMUA_Achr3G16490_001 Musa acuminata GSMUA_Achr3G16490_001 I 0.000
GSMUA_Achr3G09490_001 Musa acuminata GSMUA_Achr3G09490_001 I 0.000
GSMUA_Achr10G12830_001 Musa acuminata GSMUA_Achr10G12830_001 I 0.000
GSMUA_Achr10G05080_001 Musa acuminata GSMUA_Achr10G05080_001 I 0.000
GRMZM5G803355 Zea mays GRMZM5G803355 I 0.000
GRMZM2G428555 Zea mays GRMZM2G428555 I 0.000
GRMZM2G312419 Zea mays GRMZM2G312419 I 0.000
GRMZM2G111731 Zea mays GRMZM2G111731 I 0.000
GRMZM2G083239 Zea mays GRMZM2G083239 I 0.000
GLYMA20G04511 Glycine max GLYMA20G04511 I 0.000
GLYMA19G29670 Glycine max GLYMA19G29670 I 0.000
GLYMA07G35581 Glycine max GLYMA07G35581 I 0.000
GLYMA03G00980 Glycine max GLYMA03G00980 I 0.000
GSMUA_Achr5G27750_001 Musa acuminata GSMUA_Achr5G27750_001 I 0.000
GSMUA_Achr6G15900_001 Musa acuminata GSMUA_Achr6G15900_001 I 0.000
GSMUA_Achr6G17630_001 Musa acuminata GSMUA_Achr6G17630_001 I 0.000
MTR_4g082040 Medicago truncatula MTR_4g082040 I 0.000
MLOC_71066 Hordeum vulgare MLOC_71066 I 0.000
MLOC_3926 Hordeum vulgare MLOC_3926 I 0.000
MLOC_13062 Hordeum vulgare MLOC_13062 I 0.000
LPERR11G05690 Leersia perrieri LPERR11G05690 I 0.000
LPERR08G13020 Leersia perrieri LPERR08G13020 I 0.000
LPERR03G26860 Leersia perrieri LPERR03G26860 I 0.000
LPERR01G10360 Leersia perrieri LPERR01G10360 I 0.000
GSMUA_Achr9G29090_001 Musa acuminata GSMUA_Achr9G29090_001 I 0.000
GSMUA_Achr9G17000_001 Musa acuminata GSMUA_Achr9G17000_001 I 0.000
GSMUA_Achr9G08480_001 Musa acuminata GSMUA_Achr9G08480_001 I 0.000
GSMUA_Achr9G04990_001 Musa acuminata GSMUA_Achr9G04990_001 I 0.000
GSMUA_Achr6G32250_001 Musa acuminata GSMUA_Achr6G32250_001 I 0.000
GLYMA02G12105 Glycine max GLYMA02G12105 I 0.000
GLYMA01G05980 Glycine max GLYMA01G05980 I 0.000
AtMYB56 Arabidopsis lyrata fgenesh2_kg.6__1780__AT5G17800.1 I 0.000
Bo5g045110 Brassica oleracea Bo5g045110 I 0.000
Bo3g012780 Brassica oleracea Bo3g012780 I 0.000
Bo2g013970 Brassica oleracea Bo2g013970 I 0.000
BGIOSGA034994 Oryza indica BGIOSGA034994 I 0.000
BGIOSGA028724 Oryza indica BGIOSGA028724 I 0.000
BGIOSGA013472 Oryza indica BGIOSGA013472 I 0.000
BGIOSGA013471 Oryza indica BGIOSGA013471 I 0.000
BGIOSGA001907 Oryza indica BGIOSGA001907 I 0.000
MYB110 Arabidopsis thaliana AT3G29020 I 0.000
MYB117 Arabidopsis thaliana AT1G26780 I 0.000
AMTR_s00186p00015620 Amborella trichopoda AMTR_s00186p00015620 I 0.000
AMTR_s00119p00105590 Amborella trichopoda AMTR_s00119p00105590 I 0.000
AMTR_s00024p00137930 Amborella trichopoda AMTR_s00024p00137930 I 0.000
Bo6g095400 Brassica oleracea Bo6g095400 I 0.000
Bo6g109070 Brassica oleracea Bo6g109070 I 0.000
Bo8g076540 Brassica oleracea Bo8g076540 I 0.000
MYB105 Arabidopsis lyrata fgenesh2_kg.2__1220__AT1G69560.1 I 0.000
MYB117 Arabidopsis lyrata fgenesh1_pg.C_scaffold_1002287 I 0.000
BRADI4G22730 Brachypodium distachyon BRADI4G22730 I 0.000
BRADI3G36740 Brachypodium distachyon BRADI3G36740 I 0.000
Bra039036 Brassica rapa Bra039036 I 0.000
Bra023637 Brassica rapa Bra023637 I 0.000
Bra016285 Brassica rapa Bra016285 I 0.000
Bra006422 Brassica rapa Bra006422 I 0.000
Bra004394 Brassica rapa Bra004394 I 0.000
Bra003995 Brassica rapa Bra003995 I 0.000
Bra002107 Brassica rapa Bra002107 I 0.000
Bo9g159830 Brassica oleracea Bo9g159830 I 0.000
Bo9g008750 Brassica oleracea Bo9g008750 I 0.000
AMTR_s00010p00264600 Amborella trichopoda AMTR_s00010p00264600 I 0.000
Si011791m.g Setaria italica Si011791m.g I 0.000
PRUPE_ppa025260mg Prunus persica PRUPE_ppa025260mg I 0.000
PRUPE_ppa021779mg Prunus persica PRUPE_ppa021779mg I 0.000
PRUPE_ppa006434mg Prunus persica PRUPE_ppa006434mg I 0.000
POPTR_0019s05740 Populus trichocarpa POPTR_0019s05740 I 0.000
POPTR_0013s06320 Populus trichocarpa POPTR_0013s06320 I 0.000
POPTR_0010s17470 Populus trichocarpa POPTR_0010s17470 I 0.000
POPTR_0008s08760 Populus trichocarpa POPTR_0008s08760 I 0.000
POPTR_0007s04140 Populus trichocarpa POPTR_0007s04140 I 0.000
POPTR_0007s01430 Populus trichocarpa POPTR_0007s01430 I 0.000
POPTR_0005s06410 Populus trichocarpa POPTR_0005s06410 I 0.000
PGSC0003DMG400028119 Solanum tuberosum PGSC0003DMG400028119 I 0.000
PGSC0003DMG400024822 Solanum tuberosum PGSC0003DMG400024822 I 0.000
PGSC0003DMG400018427 Solanum tuberosum PGSC0003DMG400018427 I 0.000
Sb03g010960 Sorghum bicolor Sb03g010960 I 0.000
Sb03g010970 Sorghum bicolor Sb03g010970 I 0.000
Sb05g009460 Sorghum bicolor Sb05g009460 I 0.000
Si005038m.g Setaria italica Si005038m.g I 0.000
Si004691m.g Setaria italica Si004691m.g I 0.000
SELMODRAFT_8484 Selaginella moellendorffii SELMODRAFT_8484 I 0.000
SELMODRAFT_80553 Selaginella moellendorffii SELMODRAFT_80553 I 0.000
SELMODRAFT_6284 Selaginella moellendorffii SELMODRAFT_6284 I 0.000
SELMODRAFT_6282 Selaginella moellendorffii SELMODRAFT_6282 I 0.000
SELMODRAFT_6100 Selaginella moellendorffii SELMODRAFT_6100 I 0.000
SELMODRAFT_6091 Selaginella moellendorffii SELMODRAFT_6091 I 0.000
SELMODRAFT_38644 Selaginella moellendorffii SELMODRAFT_38644 I 0.000
SELMODRAFT_127613 Selaginella moellendorffii SELMODRAFT_127613 I 0.000
MYB110 Arabidopsis lyrata scaffold_500894.1 I 0.000
Sb08g005290 Sorghum bicolor Sb08g005290 I 0.000
Sb07g021280 Sorghum bicolor Sb07g021280 I 0.000
OS11G0207600 Oryza sativa OS11G0207600 I 0.000
OS08G0435700 Oryza sativa OS08G0435700 I 0.000
OS03G0720800 Oryza sativa OS03G0720800 I 0.000
OMERI11G05160 Oryza meridionalis OMERI11G05160 I 0.000
OMERI08G13100 Oryza meridionalis OMERI08G13100 I 0.000
OMERI03G28940 Oryza meridionalis OMERI03G28940 I 0.000
OMERI01G10960 Oryza meridionalis OMERI01G10960 I 0.000
OLONG_009506 Oryza longistaminata OLONG_009506 I 0.000
OGLUM11G05960 Oryza glumaepatula OGLUM11G05960 I 0.000
OGLUM08G16550 Oryza glumaepatula OGLUM08G16550 I 0.000
OGLUM02G34940 Oryza glumaepatula OGLUM02G34940 I 0.000
OGLUM01G12520 Oryza glumaepatula OGLUM01G12520 I 0.000
OBART08G15790 Oryza barthii OBART08G15790 I 0.000
OBART03G32240 Oryza barthii OBART03G32240 I 0.000
OB08G23250 Oryza brachyantha OB08G23250 I 0.000
OB03G39280 Oryza brachyantha OB03G39280 I 0.000
ONIVA01G13400 Oryza nivara ONIVA01G13400 I 0.000
ONIVA03G33740 Oryza nivara ONIVA03G33740 I 0.000
ONIVA08G17040 Oryza nivara ONIVA08G17040 I 0.000
OS01G0274800 Oryza sativa OS01G0274800 I 0.000
ORUFI11G06340 Oryza rufipogon ORUFI11G06340 I 0.000
ORUFI08G17710 Oryza rufipogon ORUFI08G17710 I 0.000
ORUFI03G33630 Oryza rufipogon ORUFI03G33630 I 0.000
ORUFI01G12050 Oryza rufipogon ORUFI01G12050 I 0.000
ORGLA11G0056700 Oryza glaberrima ORGLA11G0056700 I 0.000
ORGLA08G0138700 Oryza glaberrima ORGLA08G0138700 I 0.000
ORGLA03G0409400 Oryza glaberrima ORGLA03G0409400 I 0.000
OPUNC11G06210 Oryza punctata OPUNC11G06210 I 0.000
OPUNC08G13850 Oryza punctata OPUNC08G13850 I 0.000
OPUNC03G29370 Oryza punctata OPUNC03G29370 I 0.000
OPUNC01G10870 Oryza punctata OPUNC01G10870 I 0.000
ONIVA11G06220 Oryza nivara ONIVA11G06220 I 0.000
MTR_7g086960 Medicago truncatula MTR_7g086960 I 0.000