BPC2 (Arabidopsis thaliana)
BBR

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF06217 (GAGA_bind) IPR010409 AT1G14685 T024516_2.00 Ensembl (2018-Dec-8) Link out
NCBI Gene Info:
BASIC PENTACYSTEINE1 (BPC1) is a regulator of the homeotic Arabidopsis thaliana gene SEEDSTICK (STK), which controls ovule identity. BPC1 induces conformational changes by cooperative binding to purine-rich elements present in the STK regulatory sequence. STK is upregulated in bpc1 mutant.

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
AT1G14685.1 BBR 1 279
AT1G14685.2 BBR 1 279
AT1G14685.3 BBR 1 279
AT1G14685.4 BBR 1 279

Links

Other BBR family TFs
Other Arabidopsis thaliana TFs

16 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
RGD1304587 Rattus norvegicus ENSRNOG00000002944 I 1.000
C1orf35 Otolemur garnettii ENSOGAG00000010978 I 1.000
BPC2 Arabidopsis lyrata fgenesh2_kg.1__1602__AT1G14685.1 I 0.970
Carubv10009978m.g Capsella rubella Carubv10009978m.g N 0.878
Cagra.3501s0027 Capsella grandiflora Cagra.3501s0027 N 0.856
Bostr.0124s0194 Boechera stricta Bostr.0124s0194 N 0.856
Thhalv10008428m.g Eutrema salsugineum Thhalv10008428m.g N 0.815
Traes_4BL_011308A76 Triticum aestivum Traes_4BL_011308A76 I 0.798
Bo8g066170 Brassica oleracea Bo8g066170 N 0.795
Bra016686 Brassica rapa Bra016686 N 0.793
OMERI10G00680 Oryza meridionalis OMERI10G00680 I 0.786
Bo8g106640 Brassica oleracea Bo8g106640 N 0.745
Bo5g019930 Brassica oleracea Bo5g019930 N 0.745
Bra026813 Brassica rapa Bra026813 N 0.734
Bra026196 Brassica rapa Bra026196 N 0.731