Bo8g095020 (Brassica oleracea)
BBR

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF06217 (GAGA_bind) IPR010409 Bo8g095020 T024538_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
BPC6
M06719_2.00 		Arabidopsis thaliana
KAGAGAGAGAGAGAGAGAGAG
CTCTCTCTCTCTCTCTCTCTM		 Dap-seq
OMalley et al.(2016)
BPC6_col_a 		0.745 0.745
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Bo8g095020.1 BBR 1 300

Links

Other BBR family TFs
Other Brassica oleracea TFs

11 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Ocbimv22014894m.g Octopus bimaculoides Ocbimv22014894m.g I 1.000
Bra007518 Brassica rapa Bra007518 I 0.927
Bra003405 Brassica rapa Bra003405 I 0.820
Thhalv10006075m.g Eutrema salsugineum Thhalv10006075m.g I 0.753
Cagra.9562s0001 Capsella grandiflora Cagra.9562s0001 I 0.749
Bostr.3148s0250 Boechera stricta Bostr.3148s0250 I 0.749
Bo6g076850 Brassica oleracea Bo6g076850 I 0.745
BPC6 Arabidopsis thaliana AT5G42520 D 0.745
Carubv10026720m.g Capsella rubella Carubv10026720m.g I 0.735
Bra014504 Brassica rapa Bra014504 I 0.713
BPC6 Arabidopsis lyrata fgenesh1_pm.C_scaffold_8000489 I 0.705