TF Information

BPC1 *(Arabidopsis lyrata)* BBR
Pfam ID	Interpro ID	Gene ID	CIS-BP ID	Sequence source	Animal TF db
PF06217 (GAGA_bind)	IPR010409	fgenesh2_kg.5__107__AT2G01930.1	T024603_2.00	Ensembl (2018-Dec-8)	Link out
Directly determined binding motifs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
No direct experiments
Motifs from related TFs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
BPC1 M06715_2.00	Arabidopsis thaliana	GAGAGAGAGAGAGAGAGAGAGAGA	TCTCTCTCTCTCTCTCTCTCTCTC	Dap-seq OMalley et al.(2016) BPC1_col_a	0.831	0.831
BPC1 M06716_2.00	Arabidopsis thaliana	RAGAGAGAGARAGAR	YTCTYTCTCTCTCTY	Dap-seq OMalley et al.(2016) BPC1_colamp_a	0.831	0.831
BPC1 M09775_2.00	Arabidopsis thaliana	Transfac license required	Transfac license required	Transfac Matys et al.(2006) P$BPC1_Q2	0.831	0.831
For this family, TFs with SR scores > 0.700* will likely have a similar motif*

DNA Binding Domains

Protein ID	Domain	From	To	Sequence
fgenesh2_kg.5__107__AT2G01930.1	BBR	1	280	MDDDGFRNWGYYEPAAASFKGNLGLQLMSTIDRNTKPFLPGRESNLMIGSNGSYHPREHDMNYSWISQPKDNKFFNMLPISTPNYGSVMSETSGSNSMQMIHQPVVNSSRFEEIPIPPREDEIVQPSKKRKMRGSISTPTIPKAKKMRKPKEERDVASSNVQQQRVKPAKKSVDLVINGVSMDISGLPVPVCTCTGTPQQCYRWGCGGWQSACCTTNISVYPLPMSTKRRGARISGRKMSQGAFKKVLEKLATEGYSFGNAIDLKSHWARHGTNKFVTIR

Links
Other BBR family TFs
Other *Arabidopsis lyrata* TFs

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5 Related TFs

Name	Species	Gene ID	Motif Evidence	SR Score	Action