CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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LPERR10G00500
(
Leersia perrieri
)
BBR
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF06217 (GAGA_bind)
IPR010409
LPERR10G00500
T024645_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
LPERR10G00500.1
BBR
1
338
MDDDGNITLRGWGGFYEPPPPPPRNLGLQLMSSVPADRDTKQLLSASPFMHHHAHQHVPHHQHHARECGGAGGNGGAPNGGMPPTEAPSMNMNFVRNDMWMHPQHHSRETKVLHTLNVGHGGHIAHSAHHDPVGYGMIPGTHSGHTLQMMQQPESQPQPQPPPPPKEECISSPLIEENVPVISEPPPPKKRQQGRQPKVPRPKKPKKPAAPREDGAPNPPATRRRGPRKNIGMVINGIDLDLSRIPTPVCSCTGSPQQCYRWGAGGWQSACCTTTISTYPLPMSTKRRGARIAGRKMSHGAFKKVLEKLAGEGYNLNNPIDLKTFWAKHGTNKFVTIS
Links
Other
BBR
family TFs
Other
Leersia perrieri
TFs
26 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
LPERR10G00510
Leersia perrieri
LPERR10G00510
N
0.979
ONIVA10G01080
Oryza nivara
ONIVA10G01080
N
0.861
OPUNC03G13410
Oryza punctata
OPUNC03G13410
N
0.856
OPUNC10G00600
Oryza punctata
OPUNC10G00600
N
0.852
OBART10G00640
Oryza barthii
OBART10G00640
N
0.849
BGIOSGA032378
Oryza indica
BGIOSGA032378
N
0.845
OGLUM10G00620
Oryza glumaepatula
OGLUM10G00620
N
0.842
OB10G10530
Oryza brachyantha
OB10G10530
N
0.842
BGIOSGA032380
Oryza indica
BGIOSGA032380
N
0.838
OGLUM10G00630
Oryza glumaepatula
OGLUM10G00630
N
0.835
OB10G10650
Oryza brachyantha
OB10G10650
N
0.835
ORUFI10G00640
Oryza rufipogon
ORUFI10G00640
N
0.832
OS10G0115200
Oryza sativa
OS10G0115200
N
0.832
OS10G0114500
Oryza sativa
OS10G0114500
N
0.832
OLONG_022525
Oryza longistaminata
OLONG_022525
N
0.826
OMERI10G00690
Oryza meridionalis
OMERI10G00690
N
0.821
OBART10G00650
Oryza barthii
OBART10G00650
N
0.761
OMERI10G00680
Oryza meridionalis
OMERI10G00680
I
0.742
BRADI3G21380
Brachypodium distachyon
BRADI3G21380
N
0.735
Si036337m.g
Setaria italica
Si036337m.g
N
0.732
BRADI3G21390
Brachypodium distachyon
BRADI3G21390
N
0.725
OS10G0115500
Oryza sativa
OS10G0115500
N
0.718
Pavir.Ia04968
Panicum virgatum
Pavir.Ia04968
N
0.715
ORUFI10G00650
Oryza rufipogon
ORUFI10G00650
N
0.715
OGLUM10G00640
Oryza glumaepatula
OGLUM10G00640
N
0.711
MLOC_13459
Hordeum vulgare
MLOC_13459
N
0.706