CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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MTR_8g099780
(
Medicago truncatula
)
BBR
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF06217 (GAGA_bind)
IPR010409
MTR_8g099780
T024658_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
AET05031
BBR
1
312
MDDDRQYENGRHKMDYYRGAHSLWNVDPQHQIKEQNALVMNKKIRSIMAERQAALLELELEAAISEKNEALAARDVALRQRDEALAQRDNALLERDNALAALQSRNSTANFPFNGGIQRGSKRMHHSSNHISNMTEAAYSTTDIIIRDASPVTVITSEDVKSHLTKRTKENKASQTPTKIKKMGEDLNRKAYSEGTKIKSEWDRQDVGLNSIAFDETVMPVPVCTCTGVPRQCYKWGNGGWQSSCCTTTLSMHPLPQLPNKRHARIGGRKMSGNVFRRLLSRFASEGHDLSIPLDLKDYWARHGTNRYITIK
Links
Other
BBR
family TFs
Other
Medicago truncatula
TFs
10 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Ocbimv22014894m.g
Octopus bimaculoides
Ocbimv22014894m.g
I
1.000
Ca_05693
Cicer arietinum
Ca_05693
N
0.898
Bo3g149640
Brassica oleracea
Bo3g149640
I
0.830
GLYMA05G38430
Glycine max
GLYMA05G38430
N
0.825
GLYMA08G01240
Glycine max
GLYMA08G01240
N
0.818
AMTR_s00185p00053620
Amborella trichopoda
AMTR_s00185p00053620
I
0.787
chr4.CM0175.470.nc
Lotus japonicus
chr4.CM0175.470.nc
N
0.785
scaffold_200704.1
Arabidopsis lyrata
scaffold_200704.1
I
0.764
MDP0000517554
Malus domestica
MDP0000517554
N
0.703
MDP0000802164
Malus domestica
MDP0000802164
N
0.703