POPTR_0004s17060 (Populus trichocarpa)
BBR

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF06217 (GAGA_bind) IPR010409 POPTR_0004s17060 T024711_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
POPTR_0004s17060.1 BBR 1 317

Links

Other BBR family TFs
Other Populus trichocarpa TFs

9 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Ocbimv22014894m.g Octopus bimaculoides Ocbimv22014894m.g I 1.000
SapurV1A.0091s0140 Salix purpurea SapurV1A.0091s0140 N 0.923
POPTR_0009s12820 Populus trichocarpa POPTR_0009s12820 N 0.905
SapurV1A.0379s0280 Salix purpurea SapurV1A.0379s0280 N 0.894
cassava38274.valid.m1 Manihot esculenta cassava38274.valid.m1 N 0.784
30131.m007143 Ricinus communis 30131.m007143 N 0.784
evm.TU.supercontig_150.9 Carica papaya evm.TU.supercontig_150.9 N 0.769
cassava24959.valid.m1 Manihot esculenta cassava24959.valid.m1 N 0.762
orange1.1g021524m.g Citrus sinensis orange1.1g021524m.g N 0.707