CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Cucsa.026590
(
Cucumis sativus
)
BBR
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF06217 (GAGA_bind)
IPR010409
Cucsa.026590
T024799_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Cucsa.026590.1
BBR
1
277
MDGDALNMRNWGYYEPSLKAHLGLQLMSTIGERDVKHFMPGRDPSAIVNMNAAFHPRESVVSEAPVVTNWARDGWINHRDKLFNVLSPNTSYSLLAETSAAQPLQILQPLDTSRDEMVLKIEEPPVKKGTKQPKKRQNGGAPKTPKPKKPRKPKNNDPSVQQVKAPKKKMELVINGFDMDISSIPIPVCSCTGTPHQCYRWGYGGWQSACCTTSLSLHPLPMSEKRRGARIAGRKMSQGAFKKVLEKLAAQGYNFSNPIDLRSHWARHGTNKFVTIR
Links
Other
BBR
family TFs
Other
Cucumis sativus
TFs
8 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
RGD1304587
Rattus norvegicus
ENSRNOG00000002944
I
1.000
C1orf35
Otolemur garnettii
ENSOGAG00000010978
I
1.000
Cla005912
Citrullus lanatus
Cla005912
N
0.941
Traes_4BL_011308A76
Triticum aestivum
Traes_4BL_011308A76
I
0.808
OMERI10G00680
Oryza meridionalis
OMERI10G00680
I
0.786
Pm005924
Prunus mume
Pm005924
N
0.711
cassava39873.m1
Manihot esculenta
cassava39873.m1
N
0.707
PRUPE_ppa009765mg
Prunus persica
PRUPE_ppa009765mg
N
0.707