CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
fgenesh1_pm.C_chr_7.1000164
(
Pichia stipitis
)
BBR
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF06217 (GAGA_bind)
IPR010409
fgenesh1_pm.C_chr_7.1000164
T024805_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
fgenesh1_pm.C_chr_7.1000164
BBR
17
194
TPILTKIQTSSSINNSEAEQILSEFIYASEAVAASFTSSSLVDNEAGSATGFSDSAGSNALLSQLKRVQRDLRGLPPLVAEPTAVVTSSRDNKKIKFDDDDVEVEEPKNKKIKFDLEEPAEEVPEYEEEQEEKQEEHEQEEVTVIEEEESEKKHKKEKKEKKQKKEKKEKKHKKEDKE
Links
Other
BBR
family TFs
Other
Pichia stipitis
TFs
1 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
PICST_37052
Scheffersomyces stipitis
PICST_37052
N
0.989