TF Information

Bostr.25542s0071 *(Boechera stricta)* BBR
Pfam ID	Interpro ID	Gene ID	CIS-BP ID	Sequence source
PF06217 (GAGA_bind)	IPR010409	Bostr.25542s0071	T024824_2.00	JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
No direct experiments
Motifs from related TFs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
BPC5 M06717_2.00	Arabidopsis thaliana	AGAGAGAGAGAGAGAGAGAGAGAGAGAGAG	CTCTCTCTCTCTCTCTCTCTCTCTCTCTCT	Dap-seq OMalley et al.(2016) BPC5_col_a	0.803	0.803
BPC5 M06718_2.00	Arabidopsis thaliana	RRRRVNRRGAGARAGAGAGAGAGAGAGAG	CTCTCTCTCTCTCTCTYTCTCYYNBYYYY	Dap-seq OMalley et al.(2016) BPC5_colamp_a	0.803	0.803
For this family, TFs with SR scores > 0.700* will likely have a similar motif*

DNA Binding Domains

Protein ID	Domain	From	To	Sequence
Bostr.25542s0071.1.p	BBR	44	338	MESGGQYENGRCKSDYYKGTQSVWNMMPQHQMKEQHNALVMNKKIMSILAERDAAVKERNEAVAAKKEALAARDEALEQRDKALSERDNAIMERESALNALQYRENNLNYILSCAKRGGSQSCVTEESHLPAPSPVSTIPPEAANTRPTKRKKESKQGARSKGKKVGEDLNCQVASPGMKSRKDWDSNDVGLNLVTFDETTMPVPRCTCTGTARQCYKWGHGGWQSSCCTTTLSQYPLPQMPNKRHSRIGGRKMSGSVFSRLLSRLAGEGHDLSSPVDLKDYWAKHGTNRYITIK
Bostr.25542s0071.2.p	BBR	1	295	MESGGQYENGRCKSDYYKGTQSVWNMMPQHQMKEQHNALVMNKKIMSILAERDAAVKERNEAVAAKKEALAARDEALEQRDKALSERDNAIMERESALNALQYRENNLNYILSCAKRGGSQSCVTEESHLPAPSPVSTIPPEAANTRPTKRKKESKQGARSKGKKVGEDLNCQVASPGMKSRKDWDSNDVGLNLVTFDETTMPVPRCTCTGTARQCYKWGHGGWQSSCCTTTLSQYPLPQMPNKRHSRIGGRKMSGSVFSRLLSRLAGEGHDLSSPVDLKDYWAKHGTNRYITIK
Bostr.25542s0071.3.p	BBR	1	284	MKMGGASPITTKWNMMPQHQMKEQHNALVMNKKIMSILAERDAAVKERNEAVAAKKEALAARDEALEQRDKALSERDNAIMERESALNALQYRENNLNYILSCAKRGGSQSCVTEESHLPAPSPVSTIPPEAANTRPTKRKKESKQGARSKGKKVGEDLNCQVASPGMKSRKDWDSNDVGLNLVTFDETTMPVPRCTCTGTARQCYKWGHGGWQSSCCTTTLSQYPLPQMPNKRHSRIGGRKMSGSVFSRLLSRLAGEGHDLSSPVDLKDYWAKHGTNRYITIK

Links
Other BBR family TFs
Other *Boechera stricta* TFs

Invalid Input OrderBy

15 Related TFs

Name	Species	Gene ID	Motif Evidence	SR Score	Action