CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Bostr.26959s0086
(
Boechera stricta
)
BBR
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF06217 (GAGA_bind)
IPR010409
Bostr.26959s0086
T024825_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Bostr.26959s0086.1.p
BBR
1
282
MMDEDGLSNRNWGYYEPSQFRPNLGFQLIPSIIDRNERPFVSPQNQNLNFITPNVYRGGSSSVMSFPRDYTVSDAPFMSYSWLNQHRDSKFFSSLPNPSNHHHTLLVPETSRMTQPMQLLQPEVVGEVDESLKRRHCSVGERGAPAPKAKKEKKLKDNNMPRVQRERSPLLRKSIEMVINGVSMDIGGLPVPVCSCTGMPQPCYRWGCGGWQSACCTTNVSMYPLPMSTKRRGARIAGRKMSQGAFRKVLEKLSAEGFDFSIPIDLKSHWAKHGTNKFVTIR
Links
Other
BBR
family TFs
Other
Boechera stricta
TFs
7 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
RGD1304587
Rattus norvegicus
ENSRNOG00000002944
I
1.000
C1orf35
Otolemur garnettii
ENSOGAG00000010978
I
1.000
Traes_4BL_011308A76
Triticum aestivum
Traes_4BL_011308A76
I
0.778
BPC3
Arabidopsis thaliana
AT1G68120
N
0.774
OMERI10G00680
Oryza meridionalis
OMERI10G00680
I
0.738
Carubv10022023m.g
Capsella rubella
Carubv10022023m.g
N
0.728
Cagra.1111s0005
Capsella grandiflora
Cagra.1111s0005
N
0.728