Cagra.1111s0005 (Capsella grandiflora)
BBR

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF06217 (GAGA_bind) IPR010409 Cagra.1111s0005 T024829_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Cagra.1111s0005.1.p BBR 1 286

Links

Other BBR family TFs
Other Capsella grandiflora TFs

7 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
30076.m004475 Ricinus communis 30076.m004475 N 0.000
AMTR_s00018p00071850 Amborella trichopoda AMTR_s00018p00071850 I 0.000
AMTR_s00018p00074980 Amborella trichopoda AMTR_s00018p00074980 I 0.000
ANAC001 Arabidopsis lyrata fgenesh1_pg.C_scaffold_1000119 I 0.000
anac067 Arabidopsis thaliana AT4G01520 I 0.000
anac069 Arabidopsis lyrata fgenesh1_pm.C_scaffold_6002854 I 0.000
BGIOSGA027623 Oryza indica BGIOSGA027623 I 0.000
BGIOSGA031230 Oryza indica BGIOSGA031230 I 0.000
Bo00853s060 Brassica oleracea Bo00853s060 I 0.000
Bo5g002850 Brassica oleracea Bo5g002850 I 0.000
Bo6g119080 Brassica oleracea Bo6g119080 I 0.000
Bo9g004070 Brassica oleracea Bo9g004070 I 0.000
Bo9g004090 Brassica oleracea Bo9g004090 I 0.000
Bo9g004100 Brassica oleracea Bo9g004100 I 0.000
Bo9g004110 Brassica oleracea Bo9g004110 I 0.000
Bostr.25375s0002 Boechera stricta Bostr.25375s0002 I 0.000
Bostr.4825s0023 Boechera stricta Bostr.4825s0023 I 0.000
Bostr.5325s0009 Boechera stricta Bostr.5325s0009 I 0.000
Bostr.5325s0019 Boechera stricta Bostr.5325s0019 I 0.000
Bra008553 Brassica rapa Bra008553 I 0.000
Bra027596 Brassica rapa Bra027596 I 0.000
Bra036327 Brassica rapa Bra036327 I 0.000
Bra036328 Brassica rapa Bra036328 I 0.000
BRADI4G37327 Brachypodium distachyon BRADI4G37327 I 0.000
Cagra.1968s0045 Capsella grandiflora Cagra.1968s0045 I 0.000
Carubv10003260m.g Capsella rubella Carubv10003260m.g I 0.000
Carubv10009049m.g Capsella rubella Carubv10009049m.g I 0.000
Carubv10009451m.g Capsella rubella Carubv10009451m.g I 0.000
cassava39379.m1 Manihot esculenta cassava39379.m1 N 0.000
cassava39381.m1 Manihot esculenta cassava39381.m1 N 0.000
Ca_13571 Cicer arietinum Ca_13571 I 0.000
Ca_20988 Cicer arietinum Ca_20988 I 0.000
chr1.LjT41E18.160.nc Lotus japonicus chr1.LjT41E18.160.nc I 0.000
Eucgr.K02303 Eucalyptus grandis Eucgr.K02303 I 0.000
evm.TU.contig_29561 Carica papaya evm.TU.contig_29561 I 0.000
e_gw1.5.134.1 Physcomitrella patens e_gw1.5.134.1 I 0.000
F775_13961 Aegilops tauschii F775_13961 I 0.000
fgenesh1_pg.scaffold_182000024 Physcomitrella patens fgenesh1_pg.scaffold_182000024 I 0.000
gene18589-v1.0-hybrid Fragaria vesca gene18589-v1.0-hybrid N 0.000
GRMZM2G003715 Zea mays GRMZM2G003715 I 0.000
GSMUA_Achr11G07800_001 Musa acuminata GSMUA_Achr11G07800_001 N 0.000
GSMUA_Achr11G16860_001 Musa acuminata GSMUA_Achr11G16860_001 I 0.000
gw1.1.690.1 Physcomitrella patens gw1.1.690.1 I 0.000
gw1.6.394.1 Physcomitrella patens gw1.6.394.1 I 0.000
LPERR09G14720 Leersia perrieri LPERR09G14720 I 0.000
Lus10005143.g Linum usitatissimum Lus10005143.g N 0.000
Lus10030175.g Linum usitatissimum Lus10030175.g N 0.000
MDP0000214515 Malus domestica MDP0000214515 I 0.000
MDP0000231843 Malus domestica MDP0000231843 I 0.000
MDP0000282616 Malus domestica MDP0000282616 I 0.000
MDP0000311190 Malus domestica MDP0000311190 I 0.000
MDP0000575835 Malus domestica MDP0000575835 I 0.000
mgf022344m Mimulus guttatus mgf022344m I 0.000
MLOC_37843 Hordeum vulgare MLOC_37843 I 0.000
MTR_2g068880 Medicago truncatula MTR_2g068880 I 0.000
MTR_2g068920 Medicago truncatula MTR_2g068920 I 0.000
MTR_8g023840 Medicago truncatula MTR_8g023840 I 0.000
MTR_8g023860 Medicago truncatula MTR_8g023860 I 0.000
NAC68 Arabidopsis thaliana AT4G01540 D 0.000
NAC69 Arabidopsis thaliana AT4G01550 D 0.000
OB09G25590 Oryza brachyantha OB09G25590 I 0.000
OGLUM09G19480 Oryza glumaepatula OGLUM09G19480 I 0.000
OMERI09G14170 Oryza meridionalis OMERI09G14170 I 0.000
ONIVA08G03440 Oryza nivara ONIVA08G03440 I 0.000
ONIVA09G20130 Oryza nivara ONIVA09G20130 I 0.000
orange1.1g021772m.g Citrus sinensis orange1.1g021772m.g N 0.000
ORGLA09G0151800 Oryza glaberrima ORGLA09G0151800 I 0.000
ORUFI08G03870 Oryza rufipogon ORUFI08G03870 I 0.000
OS08G0157900 Oryza sativa OS08G0157900 I 0.000
Pavir.Ba01386 Panicum virgatum Pavir.Ba01386 I 0.000
Pavir.Bb02626 Panicum virgatum Pavir.Bb02626 I 0.000
Pavir.Ia03443 Panicum virgatum Pavir.Ia03443 I 0.000
Pavir.Ib01528 Panicum virgatum Pavir.Ib01528 I 0.000
PGSC0003DMG400000555 Solanum tuberosum PGSC0003DMG400000555 I 0.000
Pm028722 Prunus mume Pm028722 I 0.000
POPTR_0002s15560 Populus trichocarpa POPTR_0002s15560 I 0.000
POPTR_0002s18280 Populus trichocarpa POPTR_0002s18280 N 0.000
POPTR_0002s18290 Populus trichocarpa POPTR_0002s18290 I 0.000
POPTR_0002s18310 Populus trichocarpa POPTR_0002s18310 I 0.000
POPTR_0002s18320 Populus trichocarpa POPTR_0002s18320 I 0.000
POPTR_0014s07210 Populus trichocarpa POPTR_0014s07210 I 0.000
POPTR_0014s10330 Populus trichocarpa POPTR_0014s10330 I 0.000
POPTR_0014s10350 Populus trichocarpa POPTR_0014s10350 I 0.000
POPTR_0014s10360 Populus trichocarpa POPTR_0014s10360 I 0.000
PRUPE_ppa017765mg Prunus persica PRUPE_ppa017765mg I 0.000
PRUPE_ppa019780mg Prunus persica PRUPE_ppa019780mg N 0.000
PRUPE_ppa022384mg Prunus persica PRUPE_ppa022384mg I 0.000
SapurV1A.0024s0340 Salix purpurea SapurV1A.0024s0340 I 0.000
SapurV1A.0093s0260 Salix purpurea SapurV1A.0093s0260 I 0.000
SapurV1A.0162s0450 Salix purpurea SapurV1A.0162s0450 I 0.000
SapurV1A.0321s0340 Salix purpurea SapurV1A.0321s0340 I 0.000
SapurV1A.0321s0350 Salix purpurea SapurV1A.0321s0350 I 0.000
SapurV1A.0321s0360 Salix purpurea SapurV1A.0321s0360 I 0.000
SapurV1A.0586s0170 Salix purpurea SapurV1A.0586s0170 I 0.000
Sb02g026510 Sorghum bicolor Sb02g026510 I 0.000
Sb02g032230 Sorghum bicolor Sb02g032230 I 0.000
Si032702m.g Setaria italica Si032702m.g I 0.000
Si036303m.g Setaria italica Si036303m.g I 0.000
Thhalv10007665m.g Eutrema salsugineum Thhalv10007665m.g I 0.000
Thhalv10012158m.g Eutrema salsugineum Thhalv10012158m.g I 0.000
Thhalv10028684m.g Eutrema salsugineum Thhalv10028684m.g I 0.000
Traes_5BL_8BE382FE3 Triticum aestivum Traes_5BL_8BE382FE3 I 0.000
Traes_5DL_B69423A67 Triticum aestivum Traes_5DL_B69423A67 I 0.000
TRIUR3_13805 Triticum urartu TRIUR3_13805 I 0.000