Cagra.3501s0027 (Capsella grandiflora)
BBR

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF06217 (GAGA_bind) IPR010409 Cagra.3501s0027 T024831_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Cagra.3501s0027.1.p BBR 1 278
Cagra.3501s0027.2.p BBR 1 278

Links

Other BBR family TFs
Other Capsella grandiflora TFs

16 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
RGD1304587 Rattus norvegicus ENSRNOG00000002944 I 1.000
C1orf35 Otolemur garnettii ENSOGAG00000010978 I 1.000
Carubv10009978m.g Capsella rubella Carubv10009978m.g N 0.948
Bostr.0124s0194 Boechera stricta Bostr.0124s0194 N 0.919
Bra016686 Brassica rapa Bra016686 N 0.871
Thhalv10008428m.g Eutrema salsugineum Thhalv10008428m.g N 0.859
Bo8g066170 Brassica oleracea Bo8g066170 N 0.856
BPC2 Arabidopsis lyrata fgenesh2_kg.1__1602__AT1G14685.1 I 0.856
BPC2 Arabidopsis thaliana AT1G14685 N 0.856
Bo8g106640 Brassica oleracea Bo8g106640 N 0.812
Traes_4BL_011308A76 Triticum aestivum Traes_4BL_011308A76 I 0.798
Bra026813 Brassica rapa Bra026813 N 0.797
OMERI10G00680 Oryza meridionalis OMERI10G00680 I 0.786
Bra026196 Brassica rapa Bra026196 N 0.782
Bo5g019930 Brassica oleracea Bo5g019930 N 0.720