Carubv10009978m.g (Capsella rubella)
BBR

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF06217 (GAGA_bind) IPR010409 Carubv10009978m.g T024834_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Carubv10009973m BBR 1 277
Carubv10009978m BBR 1 277

Links

Other BBR family TFs
Other Capsella rubella TFs

17 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
C1orf35 Otolemur garnettii ENSOGAG00000010978 I 1.000
RGD1304587 Rattus norvegicus ENSRNOG00000002944 I 1.000
Cagra.3501s0027 Capsella grandiflora Cagra.3501s0027 N 0.948
Bostr.0124s0194 Boechera stricta Bostr.0124s0194 N 0.941
BPC2 Arabidopsis thaliana AT1G14685 N 0.878
BPC2 Arabidopsis lyrata fgenesh2_kg.1__1602__AT1G14685.1 I 0.878
Thhalv10008428m.g Eutrema salsugineum Thhalv10008428m.g N 0.867
Bra016686 Brassica rapa Bra016686 N 0.857
Bo8g066170 Brassica oleracea Bo8g066170 N 0.830
Traes_4BL_011308A76 Triticum aestivum Traes_4BL_011308A76 I 0.798
Bo8g106640 Brassica oleracea Bo8g106640 N 0.790
OMERI10G00680 Oryza meridionalis OMERI10G00680 I 0.786
Bra026813 Brassica rapa Bra026813 N 0.781
Bra026196 Brassica rapa Bra026196 N 0.774
Bo5g019930 Brassica oleracea Bo5g019930 N 0.744
BPC1 Arabidopsis lyrata fgenesh2_kg.5__107__AT2G01930.1 I 0.702