gene08483-v1.0-hybrid (Fragaria vesca)
BBR

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF06217 (GAGA_bind) IPR010409 gene08483-v1.0-hybrid T024855_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
BPC6
M06719_2.00
Arabidopsis thaliana
KAGAGAGAGAGAGAGAGAGAG

CTCTCTCTCTCTCTCTCTCTM
Dap-seq
OMalley et al.(2016)
BPC6_col_a
0.739 0.739
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
mrna08483.1-v1.0-hybrid BBR 40 380

Links

Other BBR family TFs
Other Fragaria vesca TFs

37 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
ENSLACG00000001309 Latimeria chalumnae ENSLACG00000001309 N 0.000
ENSLACG00000011716 Latimeria chalumnae ENSLACG00000011716 N 0.000