Gorai.002G124900 (Gossypium raimondii)
BBR

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF06217 (GAGA_bind) IPR010409 Gorai.002G124900 T024857_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
BPC6
M06719_2.00 		Arabidopsis thaliana
KAGAGAGAGAGAGAGAGAGAG
CTCTCTCTCTCTCTCTCTCTM		 Dap-seq
OMalley et al.(2016)
BPC6_col_a 		0.716 0.716
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Gorai.002G124900.1 BBR 1 336
Gorai.002G124900.2 BBR 1 336
Gorai.002G124900.3 BBR 1 326
Gorai.002G124900.4 BBR 1 326
Gorai.002G124900.5 BBR 1 326
Gorai.002G124900.6 BBR 1 336
Gorai.002G124900.7 BBR 1 336

Links

Other BBR family TFs
Other Gossypium raimondii TFs

Invalid Input OrderBy

36 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action