Gorai.005G154200 (Gossypium raimondii)
BBR

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF06217 (GAGA_bind) IPR010409 Gorai.005G154200 T024860_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Gorai.005G154200.1 BBR 1 280
Gorai.005G154200.2 BBR 1 280
Gorai.005G154200.3 BBR 1 280

Links

Other BBR family TFs
Other Gossypium raimondii TFs

18 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
C1orf35 Otolemur garnettii ENSOGAG00000010978 I 1.000
RGD1304587 Rattus norvegicus ENSRNOG00000002944 I 1.000
Gorai.002G171200 Gossypium raimondii Gorai.002G171200 N 0.811
TCM_011212 Theobroma cacao TCM_011212 N 0.799
Traes_4BL_011308A76 Triticum aestivum Traes_4BL_011308A76 I 0.798
Gorai.012G183100 Gossypium raimondii Gorai.012G183100 N 0.763
OMERI10G00680 Oryza meridionalis OMERI10G00680 I 0.762
cassava39873.m1 Manihot esculenta cassava39873.m1 N 0.756
cassava18078.valid.m1 Manihot esculenta cassava18078.valid.m1 N 0.746
cassava18077.valid.m1 Manihot esculenta cassava18077.valid.m1 N 0.746
evm.TU.supercontig_2.121 Carica papaya evm.TU.supercontig_2.121 N 0.730
29780.m001393 Ricinus communis 29780.m001393 N 0.730
Pm005924 Prunus mume Pm005924 N 0.726
PRUPE_ppa009765mg Prunus persica PRUPE_ppa009765mg N 0.726
MDP0000826219 Malus domestica MDP0000826219 N 0.719
POPTR_0010s11180 Populus trichocarpa POPTR_0010s11180 N 0.708
gene00620-v1.0-hybrid Fragaria vesca gene00620-v1.0-hybrid N 0.708