Pavir.Db02349 (Panicum virgatum)
BBR

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF06217 (GAGA_bind) IPR010409 Pavir.Db02349 T024884_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Pavir.Db02349.1.p BBR 1 330

Links

Other BBR family TFs
Other Panicum virgatum TFs

22 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
Bra003405 Brassica rapa Bra003405 I 0.707
BGIOSGA022010 Oryza indica BGIOSGA022010 N 0.727
ORGLA06G0019100 Oryza glaberrima ORGLA06G0019100 N 0.793
ORUFI06G01870 Oryza rufipogon ORUFI06G01870 N 0.793
OS06G0130600 Oryza sativa OS06G0130600 N 0.789
Sb10g002020 Sorghum bicolor Sb10g002020 N 0.891
Si006972m.g Setaria italica Si006972m.g N 0.785
Traes_4AL_A02408BC8 Triticum aestivum Traes_4AL_A02408BC8 N 0.789
Traes_7DS_FE8BC1125 Triticum aestivum Traes_7DS_FE8BC1125 N 0.793
TRIUR3_11677 Triticum urartu TRIUR3_11677 N 0.771
OPUNC06G01720 Oryza punctata OPUNC06G01720 N 0.793
ONIVA06G02210 Oryza nivara ONIVA06G02210 N 0.793
OMERI06G01780 Oryza meridionalis OMERI06G01780 N 0.789
BRADI1G49980 Brachypodium distachyon BRADI1G49980 N 0.815
GRMZM2G118690 Zea mays GRMZM2G118690 N 0.902
LPERR06G01660 Leersia perrieri LPERR06G01660 N 0.789
MLOC_15776 Hordeum vulgare MLOC_15776 N 0.778
OB06G11850 Oryza brachyantha OB06G11850 N 0.793
OBART06G01840 Oryza barthii OBART06G01840 N 0.793
OGLUM06G01860 Oryza glumaepatula OGLUM06G01860 N 0.793
OLONG_020703 Oryza longistaminata OLONG_020703 N 0.789
Pavir.J00934 Panicum virgatum Pavir.J00934 N 0.985