CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Contig10059.0.0.g15
(
Oxytricha trifallax
)
BED ZF,C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF02892 (zf-BED)
PF00096 (zf-C2H2)
IPR003656
IPR007087
Contig10059.0.0.g15
T025127_2.00
Misc (2018-Jan-19)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Contig10059.0.0.g15
C2H2 ZF
6
29
YFCEQCNIAFQKPSKLKRHIANVH
Contig10059.0.0.g15
C2H2 ZF
35
58
YKCEDCGQTYKRKEHLTRHQSSVH
Contig10059.0.0.g15
C2H2 ZF
64
92
IECPYKDSEGCLLKFPNRDQQRKHIQRKH
Contig10059.0.0.g15
C2H2 ZF
206
228
YECVDHCGKKFAKKKLLNAHLAR
Contig10059.0.0.g15
BED ZF
400
439
LHSPRLNRQLMVCMNCGKIQGSSQQTKNFMRHLGKCKKRK
Links
Other
BED ZF,C2H2 ZF
family TFs
Other
Oxytricha trifallax
TFs
0 Related TFs
">No related TF found