AMTR_s00061p00028660 (Amborella trichopoda)
BED ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF02892 (zf-BED) IPR003656 AMTR_s00061p00028660 T025454_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
ERN18994 BED ZF 192 234

Links

Other BED ZF family TFs
Other Amborella trichopoda TFs

12 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
MDP0000230416 Malus domestica MDP0000230416 N 0.974
PDK_20s1631911g001 Phoenix dactylifera PDK_20s1631911g001 N 0.974
GSMUA_Achr8G28860_001 Musa acuminata GSMUA_Achr8G28860_001 N 0.974
PGSC0003DMG401012482 Solanum tuberosum PGSC0003DMG401012482 N 0.950
TCM_016057 Theobroma cacao TCM_016057 N 0.950
gene32271-v1.0-hybrid Fragaria vesca gene32271-v1.0-hybrid N 0.950
GLYMA01G42065 Glycine max GLYMA01G42065 N 0.947
Pm023575 Prunus mume Pm023575 N 0.925
evm.TU.supercontig_29.102 Carica papaya evm.TU.supercontig_29.102 N 0.925
Solyc08g007470.1 Solanum lycopersicum Solyc08g007470.1 N 0.925
30190.m011006 Ricinus communis 30190.m011006 N 0.878
PK14046.1 Cannabis sativa PK14046.1 N 0.810