CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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AMTR_s00061p00028660
(
Amborella trichopoda
)
BED ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF02892 (zf-BED)
IPR003656
AMTR_s00061p00028660
T025454_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ERN18994
BED ZF
192
234
DACWEHCVLVDATRQKVRCNYCQREFSGGVYRMKFHLAQIKNK
Links
Other
BED ZF
family TFs
Other
Amborella trichopoda
TFs
12 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
MDP0000230416
Malus domestica
MDP0000230416
N
0.974
PDK_20s1631911g001
Phoenix dactylifera
PDK_20s1631911g001
N
0.974
GSMUA_Achr8G28860_001
Musa acuminata
GSMUA_Achr8G28860_001
N
0.974
PGSC0003DMG401012482
Solanum tuberosum
PGSC0003DMG401012482
N
0.950
TCM_016057
Theobroma cacao
TCM_016057
N
0.950
gene32271-v1.0-hybrid
Fragaria vesca
gene32271-v1.0-hybrid
N
0.950
GLYMA01G42065
Glycine max
GLYMA01G42065
N
0.947
Pm023575
Prunus mume
Pm023575
N
0.925
evm.TU.supercontig_29.102
Carica papaya
evm.TU.supercontig_29.102
N
0.925
Solyc08g007470.1
Solanum lycopersicum
Solyc08g007470.1
N
0.925
30190.m011006
Ricinus communis
30190.m011006
N
0.878
PK14046.1
Cannabis sativa
PK14046.1
N
0.810