HAT (Arabidopsis thaliana)
BED ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF02892 (zf-BED) IPR003656 AT3G42170 T025542_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
AT3G42170.1 BED ZF 68 125
AT3G42170.2 BED ZF 46 103

Links

Other BED ZF family TFs
Other Arabidopsis thaliana TFs

50 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
Bostr.0556s0643 Boechera stricta Bostr.0556s0643 N 1.000
fgenesh1_pm.C_scaffold_5000603 Arabidopsis lyrata fgenesh1_pm.C_scaffold_5000603 N 0.930
Cagra.13611s0003 Capsella grandiflora Cagra.13611s0003 N 0.907
Carubv10008021m.g Capsella rubella Carubv10008021m.g N 0.907
Bo6g018310 Brassica oleracea Bo6g018310 N 0.818
Bo4g137780 Brassica oleracea Bo4g137780 N 0.818
Thhalv10002435m.g Eutrema salsugineum Thhalv10002435m.g N 0.795
Eucgr.C01383 Eucalyptus grandis Eucgr.C01383 N 0.791
POPTR_0018s12680 Populus trichocarpa POPTR_0018s12680 N 0.791
POPTR_0004s12760 Populus trichocarpa POPTR_0004s12760 N 0.791
gene31107-v1.0-hybrid Fragaria vesca gene31107-v1.0-hybrid N 0.791
MDP0000394762 Malus domestica MDP0000394762 N 0.791
GLYMA13G22881 Glycine max GLYMA13G22881 N 0.791
gene30791-v1.0-hybrid Fragaria vesca gene30791-v1.0-hybrid N 0.791
GLYMA13G22855 Glycine max GLYMA13G22855 N 0.791
SapurV1A.0197s0170 Salix purpurea SapurV1A.0197s0170 N 0.773
SapurV1A.0034s0250 Salix purpurea SapurV1A.0034s0250 N 0.767
POPTR_0018s12690 Populus trichocarpa POPTR_0018s12690 N 0.767
POPTR_0004s12810 Populus trichocarpa POPTR_0004s12810 N 0.767
GLYMA16G32921 Glycine max GLYMA16G32921 N 0.767
Lus10032337.g Linum usitatissimum Lus10032337.g N 0.767
Cucsa.036140 Cucumis sativus Cucsa.036140 N 0.767
VIT_11s0016g05750 Vitis vinifera VIT_11s0016g05750 N 0.767
mgf025287m Mimulus guttatus mgf025287m N 0.750
Gorai.010G061600 Gossypium raimondii Gorai.010G061600 N 0.750
GLYMA17G11981 Glycine max GLYMA17G11981 N 0.750
PK27100.1 Cannabis sativa PK27100.1 N 0.750
orange1.1g002915m.g Citrus sinensis orange1.1g002915m.g N 0.750
Ciclev10007308m.g Citrus clementina Ciclev10007308m.g N 0.750
Gorai.010G061500 Gossypium raimondii Gorai.010G061500 N 0.750
TCM_038144 Theobroma cacao TCM_038144 N 0.744
Gorai.004G107300 Gossypium raimondii Gorai.004G107300 N 0.727
MDP0000197332 Malus domestica MDP0000197332 N 0.727
PRUPE_ppa001983mg Prunus persica PRUPE_ppa001983mg N 0.727
Solyc12g009640.1 Solanum lycopersicum Solyc12g009640.1 N 0.727
GLYMA09G28061 Glycine max GLYMA09G28061 N 0.727
PGSC0003DMG400002911 Solanum tuberosum PGSC0003DMG400002911 N 0.727
BGIOSGA009862 Oryza indica BGIOSGA009862 N 0.721
Thhalv10022530m.g Eutrema salsugineum Thhalv10022530m.g N 0.721
BGIOSGA020445 Oryza indica BGIOSGA020445 N 0.721
BGIOSGA018468 Oryza indica BGIOSGA018468 N 0.721
GSMUA_Achr10G16260_001 Musa acuminata GSMUA_Achr10G16260_001 N 0.721
ORGLA03G0300400 Oryza glaberrima ORGLA03G0300400 N 0.721
PGSC0003DMG400023690 Solanum tuberosum PGSC0003DMG400023690 N 0.721
Solyc10g080090.1 Solanum lycopersicum Solyc10g080090.1 N 0.721
OS03G0733400 Oryza sativa OS03G0733400 N 0.721
ORGLA05G0236800 Oryza glaberrima ORGLA05G0236800 N 0.721
ORGLA05G0072400 Oryza glaberrima ORGLA05G0072400 N 0.721
GSMUA_Achr3G02770_001 Musa acuminata GSMUA_Achr3G02770_001 N 0.721