Bo00763s120 (Brassica oleracea)
BED ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF02892 (zf-BED) IPR003656 Bo00763s120 T025615_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Bo00763s120.1 BED ZF 11 58
Bo00763s120.1 BED ZF 127 171

Links

Other BED ZF family TFs
Other Brassica oleracea TFs

31 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Cagra.4396s0051 Capsella grandiflora Cagra.4396s0051 N 0.938
Carubv10013083m.g Capsella rubella Carubv10013083m.g N 0.938
Thhalv10020031m.g Eutrema salsugineum Thhalv10020031m.g N 0.938
29889.m003394 Ricinus communis 29889.m003394 N 0.938
Bostr.19424s0919 Boechera stricta Bostr.19424s0919 N 0.938
VIT_05s0020g00790 Vitis vinifera VIT_05s0020g00790 N 0.926
AT3G17450 Arabidopsis thaliana AT3G17450 N 0.926
Cucsa.252180 Cucumis sativus Cucsa.252180 N 0.901
TCM_021492 Theobroma cacao TCM_021492 N 0.901
LjT35D18.120.nc Lotus japonicus LjT35D18.120.nc N 0.901
GSMUA_Achr3G12820_001 Musa acuminata GSMUA_Achr3G12820_001 N 0.889
GLYMA09G09291 Glycine max GLYMA09G09291 N 0.889
GLYMA15G21351 Glycine max GLYMA15G21351 N 0.889
PRUPE_ppa001126mg Prunus persica PRUPE_ppa001126mg N 0.877
Pm008491 Prunus mume Pm008491 N 0.877
Aquca_029_00055 Aquilegia coerulea Aquca_029_00055 N 0.877
MDP0000133479 Malus domestica MDP0000133479 N 0.857
MDP0000314867 Malus domestica MDP0000314867 N 0.857
cassava36089.valid.m1 Manihot esculenta cassava36089.valid.m1 N 0.852
evm.TU.supercontig_519.2 Carica papaya evm.TU.supercontig_519.2 N 0.852
PK21594.1 Cannabis sativa PK21594.1 N 0.852
orange1.1g044693m.g Citrus sinensis orange1.1g044693m.g N 0.840
POPTR_0014s10940 Populus trichocarpa POPTR_0014s10940 N 0.840
Ciclev10024195m.g Citrus clementina Ciclev10024195m.g N 0.840
TCM_004927 Theobroma cacao TCM_004927 N 0.840
SapurV1A.0294s0300 Salix purpurea SapurV1A.0294s0300 N 0.840
gene22812-v1.0-hybrid Fragaria vesca gene22812-v1.0-hybrid N 0.833
POPTR_0002s18950 Populus trichocarpa POPTR_0002s18950 N 0.815
Gorai.008G135400 Gossypium raimondii Gorai.008G135400 N 0.815
SapurV1A.0014s0420 Salix purpurea SapurV1A.0014s0420 N 0.815
Eucgr.B02527 Eucalyptus grandis Eucgr.B02527 N 0.786