Bo4g107870 (Brassica oleracea)
BED ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF02892 (zf-BED) IPR003656 Bo4g107870 T025645_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Bo4g107870.1 BED ZF 126 177

Links

Other BED ZF family TFs
Other Brassica oleracea TFs

79 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
Bostr.20129s0513 Boechera stricta Bostr.20129s0513 N 0.977
Carubv10019720m.g Capsella rubella Carubv10019720m.g N 0.955
Cagra.1725s0137 Capsella grandiflora Cagra.1725s0137 N 0.955
Bo6g067130 Brassica oleracea Bo6g067130 N 0.932
Thhalv10022530m.g Eutrema salsugineum Thhalv10022530m.g N 0.886
Eucgr.F03885 Eucalyptus grandis Eucgr.F03885 N 0.841
cassava11655.m1 Manihot esculenta cassava11655.m1 N 0.841
POPTR_0001s20900 Populus trichocarpa POPTR_0001s20900 N 0.841
POPTR_0003s02610 Populus trichocarpa POPTR_0003s02610 N 0.841
SapurV1A.0199s0250 Salix purpurea SapurV1A.0199s0250 N 0.841
SapurV1A.0344s0280 Salix purpurea SapurV1A.0344s0280 N 0.841
VIT_09s0002g07340 Vitis vinifera VIT_09s0002g07340 N 0.818
Pm013703 Prunus mume Pm013703 N 0.818
PRUPE_ppa002495mg Prunus persica PRUPE_ppa002495mg N 0.818
PGSC0003DMG400019816 Solanum tuberosum PGSC0003DMG400019816 N 0.795
gene15718-v1.0-hybrid Fragaria vesca gene15718-v1.0-hybrid N 0.795
Solyc03g116840.1 Solanum lycopersicum Solyc03g116840.1 N 0.795
TCM_027266 Theobroma cacao TCM_027266 N 0.773
Eucgr.C01383 Eucalyptus grandis Eucgr.C01383 N 0.773
GLYMA13G22855 Glycine max GLYMA13G22855 N 0.773
GLYMA13G22881 Glycine max GLYMA13G22881 N 0.773
Gorai.010G137500 Gossypium raimondii Gorai.010G137500 N 0.773
MDP0000394762 Malus domestica MDP0000394762 N 0.750
OB08G27840 Oryza brachyantha OB08G27840 N 0.750
orange1.1g002915m.g Citrus sinensis orange1.1g002915m.g N 0.750
mgf025287m Mimulus guttatus mgf025287m N 0.750
Pavir.Ia00683 Panicum virgatum Pavir.Ia00683 N 0.750
PK27100.1 Cannabis sativa PK27100.1 N 0.750
Si034159m.g Setaria italica Si034159m.g N 0.750
GLYMA17G11981 Glycine max GLYMA17G11981 N 0.750
Pavir.J05554 Panicum virgatum Pavir.J05554 N 0.750
gene30791-v1.0-hybrid Fragaria vesca gene30791-v1.0-hybrid N 0.750
Ciclev10007308m.g Citrus clementina Ciclev10007308m.g N 0.750
gene31107-v1.0-hybrid Fragaria vesca gene31107-v1.0-hybrid N 0.750
POPTR_0004s12760 Populus trichocarpa POPTR_0004s12760 N 0.744
VIT_11s0016g05750 Vitis vinifera VIT_11s0016g05750 N 0.727
Ciclev10025036m.g Citrus clementina Ciclev10025036m.g N 0.727
Carubv10008021m.g Capsella rubella Carubv10008021m.g N 0.727
Cagra.13611s0003 Capsella grandiflora Cagra.13611s0003 N 0.727
orange1.1g005485m.g Citrus sinensis orange1.1g005485m.g N 0.727
Gorai.004G107300 Gossypium raimondii Gorai.004G107300 N 0.727
Traes_4BS_D5227ED8B Triticum aestivum Traes_4BS_D5227ED8B N 0.727
Sb01g009090 Sorghum bicolor Sb01g009090 N 0.727
GSMUA_Achr8G29120_001 Musa acuminata GSMUA_Achr8G29120_001 N 0.727
PRUPE_ppa001983mg Prunus persica PRUPE_ppa001983mg N 0.727
GSMUA_Achr3G16690_001 Musa acuminata GSMUA_Achr3G16690_001 N 0.727
MLOC_75540 Hordeum vulgare MLOC_75540 N 0.727
OB08G27850 Oryza brachyantha OB08G27850 N 0.727
fgenesh1_pm.C_scaffold_5000603 Arabidopsis lyrata fgenesh1_pm.C_scaffold_5000603 N 0.727
Sb02g043380 Sorghum bicolor Sb02g043380 N 0.727
TCM_038144 Theobroma cacao TCM_038144 N 0.727
Traes_4AL_54F25AA7C Triticum aestivum Traes_4AL_54F25AA7C N 0.727
Traes_4DS_990D31BB1 Triticum aestivum Traes_4DS_990D31BB1 N 0.727
POPTR_0004s12810 Populus trichocarpa POPTR_0004s12810 N 0.721
Bo8g066350 Brassica oleracea Bo8g066350 N 0.705
Pavir.Eb00997 Panicum virgatum Pavir.Eb00997 N 0.705
Pavir.Eb00995 Panicum virgatum Pavir.Eb00995 N 0.705
GLYMA13G44351 Glycine max GLYMA13G44351 N 0.705
PK28412.1 Cannabis sativa PK28412.1 N 0.705
Pavir.J31170 Panicum virgatum Pavir.J31170 N 0.705
GLYMA07G03280 Glycine max GLYMA07G03280 N 0.705
SapurV1A.0197s0170 Salix purpurea SapurV1A.0197s0170 N 0.705
Thhalv10009614m.g Eutrema salsugineum Thhalv10009614m.g N 0.705
BRADI3G40810 Brachypodium distachyon BRADI3G40810 N 0.705
SapurV1A.0034s0250 Salix purpurea SapurV1A.0034s0250 N 0.705
PGSC0003DMG400002911 Solanum tuberosum PGSC0003DMG400002911 N 0.705
Traes_4AL_A494372EB Triticum aestivum Traes_4AL_A494372EB N 0.705
Solyc12g009640.1 Solanum lycopersicum Solyc12g009640.1 N 0.705
mgf010516m Mimulus guttatus mgf010516m N 0.705
Traes_4BS_5B1737D7C Triticum aestivum Traes_4BS_5B1737D7C N 0.705
Bo4g137780 Brassica oleracea Bo4g137780 N 0.705
Solyc10g080090.1 Solanum lycopersicum Solyc10g080090.1 N 0.705
Si000431m.g Setaria italica Si000431m.g N 0.705
Traes_4DS_9C5CECE46 Triticum aestivum Traes_4DS_9C5CECE46 N 0.705
MDP0000197332 Malus domestica MDP0000197332 N 0.705
PGSC0003DMG400023690 Solanum tuberosum PGSC0003DMG400023690 N 0.705
POPTR_0018s12680 Populus trichocarpa POPTR_0018s12680 N 0.705
POPTR_0018s12690 Populus trichocarpa POPTR_0018s12690 N 0.705
MLOC_66012 Hordeum vulgare MLOC_66012 N 0.705