Bo6g067130 (Brassica oleracea)
BED ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF02892 (zf-BED) IPR003656 Bo6g067130 T025656_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Bo6g067130.1 BED ZF 55 111

Links

Other BED ZF family TFs
Other Brassica oleracea TFs

36 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Bo4g107870 Brassica oleracea Bo4g107870 N 0.932
Bostr.20129s0513 Boechera stricta Bostr.20129s0513 N 0.909
Thhalv10022530m.g Eutrema salsugineum Thhalv10022530m.g N 0.886
Carubv10019720m.g Capsella rubella Carubv10019720m.g N 0.886
Cagra.1725s0137 Capsella grandiflora Cagra.1725s0137 N 0.886
SapurV1A.0344s0280 Salix purpurea SapurV1A.0344s0280 N 0.773
cassava11655.m1 Manihot esculenta cassava11655.m1 N 0.773
Eucgr.F03885 Eucalyptus grandis Eucgr.F03885 N 0.773
SapurV1A.0199s0250 Salix purpurea SapurV1A.0199s0250 N 0.773
POPTR_0001s20900 Populus trichocarpa POPTR_0001s20900 N 0.773
POPTR_0003s02610 Populus trichocarpa POPTR_0003s02610 N 0.773
PRUPE_ppa002495mg Prunus persica PRUPE_ppa002495mg N 0.750
Pm013703 Prunus mume Pm013703 N 0.750
VIT_09s0002g07340 Vitis vinifera VIT_09s0002g07340 N 0.750
PGSC0003DMG400019816 Solanum tuberosum PGSC0003DMG400019816 N 0.727
Eucgr.C01383 Eucalyptus grandis Eucgr.C01383 N 0.727
gene15718-v1.0-hybrid Fragaria vesca gene15718-v1.0-hybrid N 0.727
GLYMA13G22881 Glycine max GLYMA13G22881 N 0.727
mgf010516m Mimulus guttatus mgf010516m N 0.727
GLYMA13G22855 Glycine max GLYMA13G22855 N 0.727
Solyc03g116840.1 Solanum lycopersicum Solyc03g116840.1 N 0.727
Pavir.J05554 Panicum virgatum Pavir.J05554 N 0.705
Pavir.Ia00683 Panicum virgatum Pavir.Ia00683 N 0.705
SapurV1A.0197s0170 Salix purpurea SapurV1A.0197s0170 N 0.705
PK27100.1 Cannabis sativa PK27100.1 N 0.705
orange1.1g002915m.g Citrus sinensis orange1.1g002915m.g N 0.705
GLYMA17G11981 Glycine max GLYMA17G11981 N 0.705
Ciclev10007308m.g Citrus clementina Ciclev10007308m.g N 0.705
mgf025287m Mimulus guttatus mgf025287m N 0.705
TCM_027266 Theobroma cacao TCM_027266 N 0.705
Si034159m.g Setaria italica Si034159m.g N 0.705
OB08G27840 Oryza brachyantha OB08G27840 N 0.705
gene30791-v1.0-hybrid Fragaria vesca gene30791-v1.0-hybrid N 0.705
Gorai.010G137500 Gossypium raimondii Gorai.010G137500 N 0.705
gene31107-v1.0-hybrid Fragaria vesca gene31107-v1.0-hybrid N 0.705
MDP0000394762 Malus domestica MDP0000394762 N 0.705