CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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CBN28223
(
Caenorhabditis brenneri
)
BED ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF02892 (zf-BED)
IPR003656
CBN28223
T025764_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
bed-3
M00587_2.00
Caenorhabditis elegans
TCGRGANY
RNTCYCGA
PBM
Narasimhan et al.(2015)
pTH9056
0.977
0.977
For this family, TFs with SR scores >
0.700
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
CBN28223
BED ZF
122
166
AKVWRYFDELPTVEQAAECRICRKKIKATNSSTTGMIRHLRSCHV
Links
Other
BED ZF
family TFs
Other
Caenorhabditis brenneri
TFs
38 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy