CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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SGSM2
(
Callithrix jacchus
)
BED ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF02892 (zf-BED)
IPR003656
ENSCJAG00000012412
T025922_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSCJAP00000022777
BED ZF
256
289
SVYWDYALVVPFSQVVCIHCHQQTAESGGTLVLV
ENSCJAP00000022791
BED ZF
267
303
SVYWDYALVVPFSQVVCIHCHQQKSGGTLVLVSQDGI
ENSCJAP00000022794
BED ZF
306
342
SVYWDYALVVPFSQVVCIHCHQQKSGGTLVLVSQDGI
ENSCJAP00000022800
BED ZF
256
289
SVYWDYALVVPFSQVVCIHCHQQTAESGGTLVLV
Links
Other
BED ZF
family TFs
Other
Callithrix jacchus
TFs
29 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ENSMMUG00000022002
Macaca mulatta
ENSMMUG00000022002
N
1.000
ENSPANG00000024465
Papio anubis
ENSPANG00000024465
N
1.000
ENSPPYG00000007793
Pongo abelii
ENSPPYG00000007793
N
1.000
SGSM2
Pan troglodytes
ENSPTRG00000008548
N
1.000
SGSM2
Gorilla gorilla
ENSGGOG00000002449
N
1.000
ENSNLEG00000017189
Nomascus leucogenys
ENSNLEG00000017189
N
1.000
SGSM2
Homo sapiens
ENSG00000141258
N
1.000
ENSCSAG00000013779
Chlorocebus sabaeus
ENSCSAG00000013779
N
1.000
SGSM2
Pteropus vampyrus
ENSPVAG00000002165
N
0.967
ENSSTOG00000011842
Ictidomys tridecemlineatus
ENSSTOG00000011842
N
0.967
Sgsm2
Mus musculus
ENSMUSG00000038351
N
0.967
ENSMPUG00000012881
Mustela putorius furo
ENSMPUG00000012881
N
0.967
SGSM2
Loxodonta africana
ENSLAFG00000014571
N
0.967
SGSM2
Sus scrofa
ENSSSCG00000017829
N
0.967
SGSM2
Equus caballus
ENSECAG00000010959
N
0.967
SGSM2
Ornithorhynchus anatinus
ENSOANG00000008634
N
0.900
SGSM2
Monodelphis domestica
ENSMODG00000010704
N
0.862
ENSSHAG00000011609
Sarcophilus harrisii
ENSSHAG00000011609
N
0.862
ENSLACG00000018073
Latimeria chalumnae
ENSLACG00000018073
N
0.828
ENSMEUG00000015853
Macropus eugenii
ENSMEUG00000015853
N
0.828
sgsm2
Xenopus tropicalis
XB-GENE-6050632
N
0.800
Alligator_sinensis_CCG002099.1
Alligator sinensis
Alligator_sinensis_CCG002099.1
N
0.794
ENSPSIG00000013671
Pelodiscus sinensis
ENSPSIG00000013671
N
0.794
SGSM2
Anolis carolinensis
ENSACAG00000011801
N
0.765
Pvit_02550
Pogona vitticeps
Pvit_02550
N
0.765
Ogr16274
Ophisaurus gracilis
Ogr16274
N
0.765
Aan_R004292
Calypte anna
Aan_R004292
N
0.750
SGSM2
Gallus gallus
ENSGALG00000005737
N
0.735