ZBED1 (Oryctolagus cuniculus)
BED ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF02892 (zf-BED) IPR003656 ENSOCUG00000023740 T026123_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
ZBED1
M02771_2.00
Homo sapiens
HTRTCGCGACATR

YATGTCGCGAYAD
SELEX
Jolma et al.(2013)
ZBED1_1
0.977 0.977
ZBED1
M04056_2.00
Homo sapiens
VTRTCGCGAYAT

ATRTCGCGAYAB
SELEX
Yin et al.(2017)
ZBED1_eDBD_HT-SELEX
0.977 0.977
ZBED1
M09776_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$DREF_01
0.977 0.977
ZBED1
M04057_2.00
Homo sapiens
MTRTCGCGAYAK

MTRTCGCGAYAK
SELEX
Yin et al.(2017)
ZBED1_eDBD_Methyl-HT-SELEX
0.977 0.977
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSOCUP00000016013 BED ZF 23 72

Links

Other BED ZF family TFs
Other Oryctolagus cuniculus TFs

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35 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action