ENSPSIG00000002047 (Pelodiscus sinensis)
BED ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF02892 (zf-BED) IPR003656 ENSPSIG00000002047 T026200_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
ZBED1
M02771_2.00
Homo sapiens
HTRTCGCGACATR

YATGTCGCGAYAD
SELEX
Jolma et al.(2013)
ZBED1_1
1.000 1.000
ZBED1
M04056_2.00
Homo sapiens
VTRTCGCGAYAT

ATRTCGCGAYAB
SELEX
Yin et al.(2017)
ZBED1_eDBD_HT-SELEX
1.000 1.000
ZBED1
M09776_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$DREF_01
1.000 1.000
ZBED1
M04057_2.00
Homo sapiens
MTRTCGCGAYAK

MTRTCGCGAYAK
SELEX
Yin et al.(2017)
ZBED1_eDBD_Methyl-HT-SELEX
1.000 1.000
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSPSIP00000002040 BED ZF 23 72

Links

Other BED ZF family TFs
Other Pelodiscus sinensis TFs

35 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
COCCADRAFT_10390 Bipolaris zeicola COCCADRAFT_10390 N 0.000
COCSADRAFT_42080 Bipolaris sorokiniana COCSADRAFT_42080 N 0.000
PTT_15325 Pyrenophora teres PTT_15325 N 0.000
estExt_fgenesh1_pg.C_10280 Cochliobolus heterostrophus C5 estExt_fgenesh1_pg.C_10280 N 0.000