CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Dref
(
Drosophila melanogaster
)
BED ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF02892 (zf-BED)
IPR003656
FBgn0015664
T026338_2.00
Ensembl (2018-Dec-8)
Link out
NCBI Gene Info:
Enables transcription cis-regulatory region binding activity. Contributes to RNA polymerase II core promoter sequence-specific DNA binding activity. Involved in several processes, including DNA endoreduplication; regulation of cellular macromolecule biosynthetic process; and sensory organ development. Located in nucleus and polytene chromosome. Part of transcription regulator complex. Is expressed in several structures, including cuboidal/columnar epithelium; extended germ band embryo; eye disc; gonad; and prothoracic gland. [provided by Alliance of Genome Resources, Apr 2022]
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
Dref
M05901_2.00
Drosophila melanogaster
YBWTCGATAWNW
WNWTATCGAWVR
B1H
Zhu et al.(2011)
Dref_FlyReg_FBgn0015664
(Direct)
(Direct)
Dref
M09778_2.00
Drosophila melanogaster
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
I$DREF_Q3
(Direct)
(Direct)
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
For this family, TFs with SR scores >
0.700
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
FBpp0079485
BED ZF
35
84
SVYWRYFGFPSNDNNEVITKQNVVCIKCHKVLTNHGNTTNLRAHLQHRHK
FBpp0302627
BED ZF
35
84
SVYWRYFGFPSNDNNEVITKQNVVCIKCHKVLTNHGNTTNLRAHLQHRHK
Links
Other
BED ZF
family TFs
Other
Drosophila melanogaster
TFs
14 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy