CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
fgenesh_scip_prom.28083.3634
(
Phytophthora lateralis
)
BED ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF02892 (zf-BED)
IPR003656
fgenesh_scip_prom.28083.3634
T026487_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
fgenesh_scip_prom.28083.3634
BED ZF
150
206
LWQFIRLVVPDPPHLAAGRTYTNQDAKEAYCLKCKRIMHYNTGSSNNVSRHMAKFHV
Links
Other
BED ZF
family TFs
Other
Phytophthora lateralis
TFs
4 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Physo137232
Phytophthora sojae
Physo137232
N
0.976
Phyra77870
Phytophthora ramorum
Phyra77870
N
0.976
maker-pir_contig_394-fgenesh-gene-0.3
Pythium irregulare
maker-pir_contig_394-fgenesh-gene-0.3
N
0.952
maker-piw_contig_117-fgenesh-gene-0.5
Pythium iwayamai
maker-piw_contig_117-fgenesh-gene-0.5
N
0.951