CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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fgenesh_scip_prom.28083.4164
(
Phytophthora lateralis
)
BED ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF02892 (zf-BED)
IPR003656
fgenesh_scip_prom.28083.4164
T026490_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
fgenesh_scip_prom.28083.4164
BED ZF
641
692
SLAYRHTKFHRLLDDAFGKSYERRGCKYCDAVFSFKGGTTSAALRHLKTAHP
Links
Other
BED ZF
family TFs
Other
Phytophthora lateralis
TFs
6 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Phyra81851
Phytophthora ramorum
Phyra81851
N
1.000
PYU1_G004896
Pythium ultimum
PYU1_G004896
N
0.841
maker-pve_contig_1082-fgenesh-gene-0.3
Pythium vexans
maker-pve_contig_1082-fgenesh-gene-0.3
N
0.818
Physo142716
Phytophthora sojae
Physo142716
N
0.805
maker-pag1_scaffold_91-fgenesh-gene-0.5
Pythium aphanidermatum
maker-pag1_scaffold_91-fgenesh-gene-0.5
N
0.767
maker-piw_contig_778-fgenesh-gene-0.2
Pythium iwayamai
maker-piw_contig_778-fgenesh-gene-0.2
N
0.750