CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
GSMUA_Achr9G03400_001
(
Musa acuminata
)
BED ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF02892 (zf-BED)
IPR003656
GSMUA_Achr9G03400_001
T026730_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
GSMUA_Achr9P03400_001
BED ZF
17
66
DPAWKHCLMVRSAGRTKLRCVYCMKQFLGGGIHRIKEHLARHKGNASCCP
Links
Other
BED ZF
family TFs
Other
Musa acuminata
TFs
13 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
OB03G46220
Oryza brachyantha
OB03G46220
N
0.860
MLOC_64929
Hordeum vulgare
MLOC_64929
N
0.837
Traes_5BL_1FA8B5075
Triticum aestivum
Traes_5BL_1FA8B5075
N
0.837
BGIOSGA013845
Oryza indica
BGIOSGA013845
N
0.814
OS03G0822900
Oryza sativa
OS03G0822900
N
0.814
ORGLA03G0360400
Oryza glaberrima
ORGLA03G0360400
N
0.814
Pavir.J07775
Panicum virgatum
Pavir.J07775
N
0.791
Si038722m.g
Setaria italica
Si038722m.g
N
0.791
Pavir.Ia00276
Panicum virgatum
Pavir.Ia00276
N
0.791
Sb01g003040
Sorghum bicolor
Sb01g003040
N
0.767
BRADI1G03570
Brachypodium distachyon
BRADI1G03570
N
0.744
evm.TU.supercontig_1.434
Carica papaya
evm.TU.supercontig_1.434
N
0.738
30143.m001167
Ricinus communis
30143.m001167
N
0.714